RNA–Protein interactions for RNA: ENST00000389195.6

LTN1-203, Transcript of listerin E3 ubiquitin protein ligase 1, humanhuman

TSL 1 (best) BASIC

Gene LTN1, Length 2,714 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1-203ENST00000389195 SLC25A28Q96A46 364 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 PGAM5Q96HS1 289 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 MNTQ99583 582 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 C1QTNF6Q9BXI9 259 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 NOSIPQ9Y314 301 aaKnown RBP8.9□□□□□ -0.98
LTN1-203ENST00000389195 IGKV1-9A0A0C4DH69 117 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 TMEM235A6NFC5 223 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 SNTB2Q13425 540 aaKnown RBP8.9□□□□□ -0.98
LTN1-203ENST00000389195 RAB11BQ15907 218 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 ALKBH2Q6NS38 261 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 FDX2Q6P4F2 183 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 C20orf196Q8IYI0 205 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 GPR137CQ8N3F9 429 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 FER1L6-AS2Q96M78 137 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 OR10A4Q9H209 315 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 PLSCR3Q9NRY6 295 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 CKLFQ9UBR5 152 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 PRSS50Q9UI38 385 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 CAMK2AQ9UQM7 478 aa8.9□□□□□ -0.98
LTN1-203ENST00000389195 NPIPB13A6NJU9 1138 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 NPIPB4C9JG80 1138 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 MRPL33O75394 65 aaKnown RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 CD1AP06126 327 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ACKR3P25106 362 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 UBE2MP61081 183 aaKnown RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 PSG4Q00888 419 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ATAD3CQ5T2N8 411 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ANGPTL5Q86XS5 388 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 GVQW1Q8N7I0 195 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 MDS2Q8NDY4 140 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 CPEB3Q8NE35 698 aaKnown RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 WDR89Q96FK6 387 aaPredicted RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 NOX3Q9HBY0 568 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ZNF629Q9UEG4 869 aaPredicted RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 ZGRF1Q86YA3 2104 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 TACC2O95359 2948 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 PTPRQQ9UMZ3 2332 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 A0A0A6YYJ9 748 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 A0A1B0GVI7 797 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ZNF587BE7ETH6 402 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 INMT-MINDY4F8WBC2 141 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ALDOBP05062 364 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 LIPCP11150 499 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 IGFBP3P17936 291 aaPredicted RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 HLA-DMAP28067 261 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 RCVRNP35243 200 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 PSMA6P60900 246 aaKnown RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 SLC10A1Q14973 349 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 FAM205BPQ63HN1 556 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 BRICD5Q6PL45 260 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ZNF813Q6ZN06 617 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 PAQR4Q8N4S7 273 aaPredicted RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 MINDY2Q8NBR6 621 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ADPRHL1Q8NDY3 354 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 HAVCR1Q96D42 359 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 CACNG6Q9BXT2 260 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 COL6A6A6NMZ7 2263 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 M0R135 149 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 SLC17A2O00624 439 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ANGPTL7O43827 346 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 LCATP04180 440 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 HCKP08631 526 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 GNB3P16520 340 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 SLC6A1P30531 599 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 VEGFCP49767 419 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ARF1P84077 181 aaKnown RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 UNC119Q13432 240 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 UBE2V2Q15819 145 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 GLRX5Q86SX6 157 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 CHST4Q8NCG5 386 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 BHLHE23Q8NDY6 225 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 OR6F1Q8NGZ6 308 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 SETD6Q8TBK2 473 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ZNF799Q96GE5 643 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ST6GAL2Q96JF0 529 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 RADILQ96JH8 1075 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 FOXB1Q99853 325 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 OR2B2Q9GZK3 357 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 ELL3Q9HB65 397 aaPredicted RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 GPR35Q9HC97 309 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 CRIM1Q9NZV1 1036 aa8.89□□□□□ -0.99
LTN1-203ENST00000389195 CDV3Q9UKY7 258 aaKnown RBP8.89□□□□□ -0.99
LTN1-203ENST00000389195 LOC102725191A0A1B0GVB3 256 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 GJE1A6NN92 205 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 M0QYG6 137 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 SGCEO43556 437 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 NME2P1O60361 137 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 VAMP5O95183 116 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 RAF1P04049 648 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 PDGFAP04085 211 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 ZNF20P17024 532 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 CXCL3P19876 107 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 NME2P22392 152 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 HTR5AP47898 357 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 MMP15P51511 669 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 HLXQ14774 488 aaPredicted RBP8.88□□□□□ -0.99
LTN1-203ENST00000389195 NKPD1Q17RQ9 610 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 PCGF3Q3KNV8 242 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 HIKESHIQ53FT3 197 aa8.88□□□□□ -0.99
LTN1-203ENST00000389195 PLA1AQ53H76 456 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms