RNA–Protein interactions for RNA: ENST00000384254.1

RNU6-40P-201, Transcript of RNA, U6 small nuclear 40, pseudogene, humanhuman

BASIC

Gene RNU6-40P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-40P-201ENST00000384254 BET1O15155 118 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 RBFOX2O43251 390 aaKnown RBP eCLIP3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 YIF1AO95070 293 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 OTCP00480 354 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 IGKV2D-28P01615 120 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR8U9P0C7N5 309 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 GOLGA8HP0CJ92 632 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 PGA4P0DJD7 388 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 PGA3P0DJD8 388 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 SRMP19623 302 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR1G1P47890 313 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 CLDN6P56747 220 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 LCN2P80188 198 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 KDSRQ06136 332 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 LOXL1Q08397 574 aaPredicted RBP3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 EBI3Q14213 229 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 GCSAMLQ5JQS6 135 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 LCE3EQ5T5B0 92 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF691Q5VV52 312 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 WDFY1Q8IWB7 410 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 GPR26Q8NDV2 337 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 SCGB3A2Q96PL1 93 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 UQCC2Q9BRT2 126 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 TDRD3Q9H7E2 651 aaKnown RBP3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC17A7Q9P2U7 560 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 HES2Q9Y543 173 aa3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 GPATCH8Q9UKJ3 1502 aaKnown RBP3.37□□□□□ -1.87
RNU6-40P-201ENST00000384254 ADAMTS13Q76LX8 1427 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC22A20A6NK97 555 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 ERI3O43414 337 aaKnown RBP3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 NMT2O60551 498 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC16A7O60669 478 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 REM1O75628 298 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 ADRA2AP08913 450 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 RHOXF2BP0C7M4 288 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF688P0C7X2 276 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 C1GALT1C1LP0DN25 315 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF32P17041 273 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 ATP6V0D1P61421 351 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 RPL23P62829 140 aaKnown RBP3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 CDK5Q00535 292 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 RBMY1FQ15415 496 aaKnown RBP3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 TSC22D1Q15714 1073 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 MPV17L2Q567V2 206 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 CAVIN4Q5BKX8 364 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 AP1ARQ63HQ0 302 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 CDKL3Q8IVW4 592 aaPredicted RBP3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 UBALD2Q8IYN6 164 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 LGI3Q8N145 548 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 ASZ1Q8WWH4 475 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 NARS2Q96I59 477 aaKnown RBP3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 RNF157Q96PX1 679 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 TOLLIPQ9H0E2 274 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 LZTFL1Q9NQ48 299 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 RRAGDQ9NQL2 400 aaPredicted RBP3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 PRO0461Q9UI25 63 aa3.36□□□□□ -1.87
RNU6-40P-201ENST00000384254 SMIM26A0A096LP01 95 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 A0A0U1RQV1 116 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 GABRR3A8MPY1 467 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 BPY2O14599 106 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 RAD1O60671 282 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 SLC19A2O60779 497 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF324O75467 553 aaPredicted RBP3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 GCM2O75603 506 aaPredicted RBP3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 MRPL3P09001 348 aaKnown RBP3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 HOXB8P17481 243 aaPredicted RBP3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 NPY1RP25929 384 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 CRADDP78560 199 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 C5orf64Q2M2E5 130 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 TMPRSS11AQ6ZMR5 421 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 Q6ZR03 302 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 RTL4Q6ZR62 310 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 NTM-AS1Q6ZSK4 140 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 WDR86Q86TI4 376 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 KIF2BQ8N4N8 673 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 ARRDC1Q8N5I2 433 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR4K5Q8NGD3 323 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR10W1Q8NGF6 305 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 FRZBQ92765 325 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 RERGQ96A58 199 aaPredicted RBP3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF488Q96MN9 340 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 TEAD3Q99594 435 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 RSG1Q9BU20 258 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 NAA50Q9GZZ1 169 aaKnown RBP3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 OR52D1Q9H346 318 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 C1orf198Q9H425 327 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 ENOPH1Q9UHY7 261 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 FLVCR2Q9UPI3 526 aa3.35□□□□□ -1.87
RNU6-40P-201ENST00000384254 A0A1W2PPV4 95 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 A0A1W2PRF3 423 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 A0A1W2PRM7 423 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF705GA8MUZ8 300 aaPredicted RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 ZNF99A8MXY4 864 aaPredicted RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 HACD1B0YJ81 288 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 H3BN98 237 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 LCA5LO95447 670 aa3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 CATP04040 527 aaKnown RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 DCNP07585 359 aaKnown RBP3.34□□□□□ -1.87
RNU6-40P-201ENST00000384254 TACSTD2P09758 323 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms