RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PMS2P11Q13670 270 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 TMEM183BQ1AE95 376 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 LRRC26Q2I0M4 334 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 ZNF628Q5EBL2 1059 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 FFAR4Q5NUL3 377 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 GLCCI1Q86VQ1 547 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 OR4F17Q8NGA8 305 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 DYRK2Q92630 601 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 GPR84Q9NQS5 396 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 BET1LQ9NYM9 111 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 FBXO4Q9UKT5 387 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 FLVCR2Q9UPI3 526 aa5.34□□□□□ -1.55
RFX3-204ENST00000382004 CCDC88CQ9P219 2028 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 MS4A18H0YCH9 400 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 SLC19A1P41440 591 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 SPCS3P61009 180 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 INSM1Q01101 510 aaPredicted RBP5.34□□□□□ -1.56
RFX3-204ENST00000382004 MS4A18Q3C1V0 323 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 WDR88Q6ZMY6 472 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 SLC16A12Q6ZSM3 486 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 MYPOPQ86VE0 399 aaPredicted RBP5.34□□□□□ -1.56
RFX3-204ENST00000382004 LSRQ86X29 649 aaPredicted RBP5.34□□□□□ -1.56
RFX3-204ENST00000382004 MARCH1Q8TCQ1 289 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 GALMQ96C23 342 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 ADGRG7Q96K78 797 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 OR2A14Q96R47 310 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 ZIC5Q96T25 663 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 FAAP24Q9BTP7 215 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 SLC46A2Q9BY10 475 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 HINT3Q9NQE9 182 aaKnown RBP5.34□□□□□ -1.56
RFX3-204ENST00000382004 WSB2Q9NYS7 404 aaPredicted RBP5.34□□□□□ -1.56
RFX3-204ENST00000382004 TIMM10BQ9Y5J6 103 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 CCDC187A0A096LP49 1063 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 M0R135 149 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 SPRY3O43610 288 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 MT-ATP6P00846 226 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 HAAOP46952 286 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 CLN3Q13286 438 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 KCNAB1Q14722 419 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 NPY5RQ15761 445 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 GUK1Q16774 197 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 SPATA46Q5T0L3 261 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 B3GNTL1Q67FW5 361 aaPredicted RBP5.34□□□□□ -1.56
RFX3-204ENST00000382004 TAS1R1Q7RTX1 841 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 OR10V1Q8NGI7 309 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 IL22RA2Q969J5 263 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 UBE2FQ969M7 185 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 WBP2Q969T9 261 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 ZNF799Q96GE5 643 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 POM121Q96HA1 1249 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 UBQLN3Q9H347 655 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 C10orf71Q711Q0 1435 aa5.34□□□□□ -1.56
RFX3-204ENST00000382004 ASXL3Q9C0F0 2248 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 C7orf72A4D263 438 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CST7O76096 145 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 T-ENOLP0DO92 83 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 ASCL1P50553 236 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 MRPS21P82921 87 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 TCEAL1Q15170 157 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 C6orf15Q6UXA7 325 aaPredicted RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 SCD5Q86SK9 330 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 RBM45Q8IUH3 476 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 TM4SF18Q96CE8 201 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 RPS19P39019 145 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 ZXDAP98168 799 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 LIPNQ5VXI9 398 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 OTPQ5XKR4 325 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 ZNF429Q86V71 674 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CMTM4Q8IZR5 234 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 LMO3Q8TAP4 145 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 NUDCD2Q8WVJ2 157 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 C19orf43Q9BQ61 176 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 GSX2Q9BZM3 304 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 LYRM2Q9NU23 88 aaPredicted RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 DOK5Q9P104 306 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CSN3P07498 182 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CYC1P08574 325 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 APOBEC1P41238 236 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 RPL29P47914 159 aaKnown RBP5.33□□□□□ -1.56
RFX3-204ENST00000382004 BTG1P62324 171 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 TPBGQ13641 420 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 OR52N1Q8NH53 320 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 GPX8Q8TED1 209 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 GMLQ99445 158 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 PLEKHA2Q9HB19 425 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 SPAG17Q6Q759 2223 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 CCDC88AQ3V6T2 1871 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 PTGESO14684 152 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 GCGP01275 180 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 YPEL5P62699 121 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 SRSF9Q13242 221 aaKnown RBP eCLIP5.33□□□□□ -1.56
RFX3-204ENST00000382004 TMEM65Q6PI78 240 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 HAPLN2Q9GZV7 340 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 RNF167Q9H6Y7 350 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 TRGV10A0A0A0MS01 117 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 C1QBP02746 253 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 RAF1P04049 648 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 DDOSTP39656 456 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 DEFB109BQ30KR1 87 aa5.33□□□□□ -1.56
RFX3-204ENST00000382004 HTR3DQ70Z44 454 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms