RNA–Protein interactions for RNA: ENST00000381140.8

GTF3A-201, Transcript of general transcription factor IIIA, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GTF3A, Length 1,383 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-201ENST00000381140 SLC22A31A6NKX4 558 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 H3BSA7 217 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 RGS10O43665 173 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 MT-ND5P03915 603 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 H2BFMP0C1H6 154 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 PRSS12P56730 875 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 GRB2P62993 217 aaKnown RBP16.57■□□□□ 0.24
GTF3A-201ENST00000381140 PSG7Q13046 419 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 CLEC2AQ6UVW9 174 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 AHSA2Q719I0 299 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 PRSS48Q7RTY5 328 aa16.57■□□□□ 0.24
GTF3A-201ENST00000381140 WARS2Q9UGM6 360 aaKnown RBP16.57■□□□□ 0.24
GTF3A-201ENST00000381140 H7C1Q1 480 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 SMAD7O15105 426 aaKnown RBP16.56■□□□□ 0.24
GTF3A-201ENST00000381140 TPD52L2O43399 206 aaKnown RBP16.56■□□□□ 0.24
GTF3A-201ENST00000381140 CDK1P06493 297 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 CD99P14209 185 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 ATP6V1B1P15313 513 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 CX3CR1P49238 355 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 TNK1Q13470 666 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.56■□□□□ 0.24
GTF3A-201ENST00000381140 OR5AS1Q8N127 324 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 RNF133Q8WVZ7 376 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 NEU4Q8WWR8 484 aaPredicted RBP16.56■□□□□ 0.24
GTF3A-201ENST00000381140 C1QTNF5Q9BXJ0 243 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 YIPF3Q9GZM5 350 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 BRD7Q9NPI1 651 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 ERVK-18Q9QC07 812 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 PURGQ9UJV8 347 aaKnown RBP16.56■□□□□ 0.24
GTF3A-201ENST00000381140 CR1P17927 2039 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 ACANP16112 2415 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 HIVEP1P15822 2718 aa16.56■□□□□ 0.24
GTF3A-201ENST00000381140 C17orf100A8MU93 164 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 J3QW42 95 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 PSMD9O00233 223 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 TBX1O43435 398 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 SPRY3O43610 288 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 APOL3O95236 402 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 ANXA2P07355 339 aaKnown RBP16.55■□□□□ 0.24
GTF3A-201ENST00000381140 TUBG1P23258 451 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 MAGEB1P43366 347 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 MTNR1AP48039 350 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 ZNF81P51508 661 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 RAB40BQ12829 278 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 MALLQ13021 153 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 TSTQ16762 297 aaKnown RBP16.55■□□□□ 0.24
GTF3A-201ENST00000381140 SNAI3Q3KNW1 292 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 KLHL22Q53GT1 634 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 DRAM2Q6UX65 266 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 LRRN1Q6UXK5 716 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 COLCA1Q6ZS62 124 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 KRT77Q7Z794 578 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 SPARTQ8N0X7 666 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 OR51G2Q8NGK0 314 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 MSL2Q9HCI7 577 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 TUBG2Q9NRH3 451 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 HAO2Q9NYQ3 351 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 PCDHGB1Q9Y5G3 927 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 SNX5Q9Y5X3 404 aa16.55■□□□□ 0.24
GTF3A-201ENST00000381140 C5orf63A6NC05 138 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 MT-ND2P03891 347 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 TFAP2AP05549 437 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 DAOP14920 347 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 ALOX5APP20292 161 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 ANOS1P23352 680 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 OTX1P32242 354 aaPredicted RBP16.54■□□□□ 0.24
GTF3A-201ENST00000381140 OPRL1P41146 370 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 PDLIM4P50479 330 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 CCL8P80075 99 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 ST3GAL4Q11206 333 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 GGTLC2Q14390 218 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 OR2T2Q6IF00 324 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 MRPL21Q7Z2W9 205 aaKnown RBP16.54■□□□□ 0.24
GTF3A-201ENST00000381140 SLC35F2Q8IXU6 374 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 CIARTQ8N365 385 aaPredicted RBP16.54■□□□□ 0.24
GTF3A-201ENST00000381140 STX19Q8N4C7 294 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 SVOPQ8N4V2 548 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 OR2AE1Q8NHA4 323 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 FAM168AQ92567 244 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 HAVCR1Q96D42 359 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 LGALS12Q96DT0 336 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 RNFT2Q96EX2 444 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 ADGRL4Q9HBW9 690 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 FGF20Q9NP95 211 aaPredicted RBP16.54■□□□□ 0.24
GTF3A-201ENST00000381140 COPS3Q9UNS2 423 aa16.54■□□□□ 0.24
GTF3A-201ENST00000381140 IGHV4-30-2A0A087WSY4 118 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 ZSCAN5BA6NJL1 495 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 RNF223E7ERA6 249 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 LYNX1G3V0Z9 82 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 HPXP02790 462 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 LYNX1P0DP58 116 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 RAC2P15153 192 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 ATP6V1E1P36543 226 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 MMP15P51511 669 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 RNLSQ5VYX0 342 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 FBXW12Q6X9E4 464 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 FAM57BQ71RH2 274 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 RFLNBQ8N5W9 214 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 BHLHE23Q8NDY6 225 aa16.53■□□□□ 0.24
GTF3A-201ENST00000381140 UBASH3BQ8TF42 649 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms