RNA–Protein interactions for RNA: ENST00000378726.1

SSU72-204, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 2,238 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-204ENST00000378726 ZNF224Q9NZL3 707 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 MGAT4CQ9UBM8 478 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 FOXJ3Q9UPW0 622 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 POLR1DQ9Y2S0 133 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 LHFPL6Q9Y693 200 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 A0A1B0GUH1 482 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 KLRC4-KLRK1H3BQV0 150 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 SRSF10O75494 262 aaKnown RBP17.16■□□□□ 0.34
SSU72-204ENST00000378726 ALDOBP05062 364 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 RRASP10301 218 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 MAGEA5P43359 124 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 TMEM123Q8N131 208 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 SYNPRQ8TBG9 265 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 FCAMRQ8WWV6 532 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 TMEM106AQ96A25 262 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 WDR89Q96FK6 387 aaPredicted RBP17.16■□□□□ 0.34
SSU72-204ENST00000378726 SLITRK2Q9H156 845 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 NOX3Q9HBY0 568 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 DLL3Q9NYJ7 618 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 OR5V1Q9UGF6 321 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 MAB21L2Q9Y586 359 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 V9GY05 133 aa17.16■□□□□ 0.34
SSU72-204ENST00000378726 TMEM269A0A1B0GVZ9 245 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 NME2P1O60361 137 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 CD46P15529 392 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 CTRB1P17538 263 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 ANXA7P20073 488 aaKnown RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 NME2P22392 152 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 GUCA1AP43080 201 aaPredicted RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 MEOX1P50221 254 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 RAB14P61106 215 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 OPCMLQ14982 345 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 KCNMB1Q16558 191 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 PXDC1Q5TGL8 231 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 CTRB2Q6GPI1 263 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 STAC2Q6ZMT1 411 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 CHMP1BQ7LBR1 199 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 TMEM251Q8N6I4 163 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 UXS1Q8NBZ7 420 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 HAS2Q92819 552 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 ZNF552Q9H707 407 aaPredicted RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 GDF2Q9UK05 429 aaPredicted RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 ASPMQ8IZT6 3477 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 NAP1L6A6NFF2 107 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 WT1P19544 449 aaPredicted RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 CXCL2P19875 107 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 DCTDP32321 178 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 ARG2P78540 354 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 SGCAQ16586 387 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 LINC00303Q3SY05 128 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 PDSS1Q5T2R2 415 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 GLDNQ6ZMI3 551 aaPredicted RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 CDH24Q86UP0 819 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 GSX2Q9BZM3 304 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 RABL2AQ9UBK7 228 aaPredicted RBP17.15■□□□□ 0.34
SSU72-204ENST00000378726 ASH2LQ9UBL3 628 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 RABL2BQ9UNT1 228 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 FLVCR1Q9Y5Y0 555 aa17.15■□□□□ 0.34
SSU72-204ENST00000378726 TRBV5-7A0A0A0MS05 114 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 ANKRD20A5PA0PJZ0 165 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 CCL11P51671 97 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 AP3S2P59780 193 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 TMEM69Q5SWH9 247 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 C10orf128Q5T292 105 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 CFAP77Q6ZQR2 320 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 OR10S1Q8NGN2 331 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 TSEN15Q8WW01 171 aaKnown RBP17.14■□□□□ 0.33
SSU72-204ENST00000378726 INTS12Q96CB8 462 aaKnown RBP17.14■□□□□ 0.33
SSU72-204ENST00000378726 ZNF845Q96IR2 970 aaPredicted RBP17.14■□□□□ 0.33
SSU72-204ENST00000378726 RBM24Q9BX46 236 aaKnown RBP17.14■□□□□ 0.33
SSU72-204ENST00000378726 G6PC2Q9NQR9 355 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 ZNF69Q9UC07 566 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 OR52A1Q9UKL2 312 aa17.14■□□□□ 0.33
SSU72-204ENST00000378726 PHF3Q92576 2039 aaKnown RBP17.14■□□□□ 0.33
SSU72-204ENST00000378726 ZNF716A6NP11 495 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 BET1O15155 118 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 GLSO94925 669 aaPredicted RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 CDK2P24941 298 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 NTF4P34130 210 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 SRYQ05066 204 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 OLFML2AQ68BL7 652 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 CPNE4Q96A23 557 aaPredicted RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 PNPLA2Q96AD5 504 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 S100A16Q96FQ6 103 aaKnown RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 FOXD3Q9UJU5 478 aaPredicted RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 PTPRBP23467 1997 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 DOK2O60496 412 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 LHX2P50458 406 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 ZNF133P52736 654 aaPredicted RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 PPIAP62937 165 aaKnown RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 KLHL24Q6TFL4 600 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 ASCL5Q7RTU5 278 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 PNPLA5Q7Z6Z6 429 aaPredicted RBP17.13■□□□□ 0.33
SSU72-204ENST00000378726 AIFM2Q9BRQ8 373 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 SLC6A15Q9H2J7 730 aa17.13■□□□□ 0.33
SSU72-204ENST00000378726 TRAV8-7A0A075B6U6 113 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 PLSCR5A0PG75 271 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 DHHO43323 396 aa17.12■□□□□ 0.33
SSU72-204ENST00000378726 TMIGD3P0DMS9 266 aaPredicted RBP17.12■□□□□ 0.33
SSU72-204ENST00000378726 MMP16P51512 607 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms