RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 EGR3Q06889 387 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 IL10RAQ13651 578 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 THSD4Q6ZMP0 1018 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 STAC2Q6ZMT1 411 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 TMPRSS7Q7RTY8 843 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 UBE3DQ7Z6J8 389 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 SMRP1Q8NCR6 262 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 SECTM1Q8WVN6 248 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 KCNE4Q8WWG9 221 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 KLK11Q9UBX7 282 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 M0R135 149 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 B3GALNT1O75752 331 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 RAB1AP62820 205 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 AADACL3Q5VUY0 350 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.56□□□□□ -0.24
NPHP4-201ENST00000378156 CARFQ8N187 725 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 SARAFQ96BY9 339 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF799Q96GE5 643 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 SIGLEC11Q96RL6 698 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 ZCCHC4Q9H5U6 513 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 LANCL2Q9NS86 450 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 MIA3Q5JRA6 1907 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 TFF2Q03403 129 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 CLN3Q13286 438 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 TCTE3Q8IZS6 198 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF75AQ96N20 296 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 B3GAT1Q9P2W7 334 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 ARID1AO14497 2285 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 SPAG17Q6Q759 2223 aa13.56□□□□□ -0.24
NPHP4-201ENST00000378156 RBBP6Q7Z6E9 1792 aaKnown RBP13.56□□□□□ -0.24
NPHP4-201ENST00000378156 A0A0B4J2E0 115 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 A0A1B0GX12 115 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 SNRPGP15A8MWD9 76 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 PMP2P02689 132 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 DCTDP32321 178 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 CLDN15P56746 228 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 PPP1CAP62136 330 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 NLRC3Q7RTR2 1065 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 PPP5D1E7EU14 171 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 CCSO14618 274 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 TPPPO94811 219 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 LTC4SQ16873 150 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 POFUT1Q9H488 388 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 PCM1Q15154 2024 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 GLSO94925 669 aaPredicted RBP13.55□□□□□ -0.24
NPHP4-201ENST00000378156 ATF1P18846 271 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 SDHBP21912 280 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 RFC3P40938 356 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 MESP2Q0VG99 397 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 ZIC1Q15915 447 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 PRICKLE4Q2TBC4 344 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 BANF2Q9H503 90 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 NDRG3Q9UGV2 375 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 ANKUB1A6NFN9 424 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 HPNP05981 417 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 S100A7P31151 101 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 IFITM3Q01628 133 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 CLINT1Q14677 625 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 GPNMBQ14956 572 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 OR52W1Q6IF63 320 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 NAA40Q86UY6 237 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 C1orf210Q8IVY1 113 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 HIPK2Q9H2X6 1198 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 B9D1Q9UPM9 204 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 PARP14Q460N5 1801 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 LTBP1Q14766 1721 aa13.55□□□□□ -0.24
NPHP4-201ENST00000378156 LRP5LA4QPB2 252 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 BTBD17A6NE02 478 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 TMEM235A6NFC5 223 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 RBP2P50120 134 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 EXOSC2Q13868 293 aaKnown RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 ADIRFQ15847 76 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 CDH26Q8IXH8 852 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 OR2G2Q8NGZ5 317 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 OR52N5Q8NH56 324 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 GPR119Q8TDV5 335 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 PLEKHB1Q9UF11 243 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 CBY1Q9Y3M2 126 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 MTCH2Q9Y6C9 303 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 OR2C1O95371 312 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 SLC17A1Q14916 467 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 RNLSQ5VYX0 342 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 SHEQ5VZ18 495 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 IER2Q9BTL4 223 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 ABHD6Q9BV23 337 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 RNF32Q9H0A6 362 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 HSPB2A8KAH6 182 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 F6UZH7 168 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 DHHO43323 396 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 GREM1O60565 184 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 TMEM127O75204 238 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF133P52736 654 aaPredicted RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 HSPB2Q16082 182 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 ZNF239Q16600 458 aaKnown RBP13.54□□□□□ -0.24
NPHP4-201ENST00000378156 ARV1Q9H2C2 271 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 BCO1Q9HAY6 547 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 GAB2Q9UQC2 676 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 DNAJC13O75165 2243 aa13.54□□□□□ -0.24
NPHP4-201ENST00000378156 A0A1B0GUH1 482 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms