RNA–Protein interactions for RNA: ENST00000378122.4

PCDHA9-201, Transcript of protocadherin alpha 9, humanhuman

BASIC

Gene PCDHA9, Length 6,900 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA9-201ENST00000378122 ARRDC5A6NEK1 342 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 RPL12P30050 165 aaKnown RBP10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 BSGP35613 385 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 RPS27P42677 84 aaKnown RBP10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 GUCA2AQ02747 115 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 SMIM15Q7Z3B0 74 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 PRSS42Q7Z5A4 293 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 LINC01465Q8N7H1 131 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 OR4F5Q8NH21 305 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 OR4F4Q96R69 305 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 HMGA1P17096 107 aaKnown RBP10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 SNCAP37840 140 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 H2BFWTQ7Z2G1 175 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 SMIM19Q96E16 107 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 KIRREL1Q96J84 757 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 KCNJ15Q99712 375 aa10.87□□□□□ -0.67
PCDHA9-201ENST00000378122 FCMRO60667 390 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 EIF1BO60739 113 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 GUSBP08236 651 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 QDPRP09417 244 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SFTA3P0C7M3 94 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 EGR3Q06889 387 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 EXT1Q16394 746 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 OR1J2Q8NGS2 313 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 OR10X1Q8NGY0 326 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 RSRP1Q9BUV0 290 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 IFITM5A6NNB3 132 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ACSM4P0C7M7 580 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 APOBEC1P41238 236 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 RPL18Q07020 188 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 PYCR3Q53H96 274 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 LAIR1Q6GTX8 287 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 LYG2Q86SG7 212 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 CA13Q8N1Q1 262 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 NUDCD2Q8WVJ2 157 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 PLA2G12AQ9BZM1 189 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 DUSP22Q9NRW4 184 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 RREB1Q92766 1687 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 FAM221AA4D161 298 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 OR6C68A6NDL8 312 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 TLCD2A6NGC4 264 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 CHRM2P08172 466 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF77Q15935 545 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 DBX2Q6ZNG2 339 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 CPEB3Q8NE35 698 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 HEYLQ9NQ87 328 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 BCORQ6W2J9 1755 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 CRXO43186 299 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 TRAF3IP2O43734 574 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 RAB35Q15286 201 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF561Q8N587 486 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 AKR1E2Q96JD6 320 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 IFT22Q9H7X7 185 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 CRLF2Q9HC73 371 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SLC22A13Q9Y226 551 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SHROOM3Q8TF72 1996 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SERTM2A0A1B0GWG4 89 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 EIF4E2O60573 245 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 S100A8P05109 93 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 NAT1P18440 290 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 DIO1P49895 249 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 RAB1AP62820 205 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 LCN15Q6UWW0 184 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 TVP23CQ96ET8 276 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 WDR89Q96FK6 387 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 PLEKHF2Q9H8W4 249 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 BCO1Q9HAY6 547 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 FGF20Q9NP95 211 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 KLK11Q9UBX7 282 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 CHRNA9Q9UGM1 479 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ING1Q9UK53 422 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 FLVCR1Q9Y5Y0 555 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 PTPRZ1P23471 2315 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 TRAV20A0A0B4J274 112 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SOX15O60248 233 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF354AO60765 605 aaPredicted RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 OR2J3O76001 311 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 IAPPP10997 89 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 NQO2P16083 231 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 EIF1P41567 113 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF85Q03923 595 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ZNF92Q03936 586 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SIGLEC14Q08ET2 396 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ACKR1Q16570 336 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 EMC4Q5J8M3 183 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 GUSBP11Q6P575 273 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 OR8U1Q8NH10 309 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 MARCH1Q8TCQ1 289 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 SLC6A13Q9NSD5 602 aa10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 RYDENQ9NUL5 291 aaKnown RBP10.86□□□□□ -0.67
PCDHA9-201ENST00000378122 ST8SIA3O43173 380 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 METTL15P1P0C7V9 234 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 ACKR3P25106 362 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 G0S2P27469 103 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 CDK5R1Q15078 307 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 NKG7Q16617 165 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 TCTN3Q6NUS6 607 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 TMEM81Q6P7N7 255 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 BTNL8Q6UX41 500 aa10.85□□□□□ -0.67
PCDHA9-201ENST00000378122 OR4C16Q8NGL9 310 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms