RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 MMP24Q9Y5R2 645 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 TRBV11-1A0A0K0K1C0 115 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 ZC3H12DA2A288 527 aaKnown RBP13.93□□□□□ -0.18
FXN-201ENST00000377270 FAM221AA4D161 298 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 FAM157AC9JC47 383 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 H7C417 338 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 SMAD9O15198 467 aaKnown RBP13.93□□□□□ -0.18
FXN-201ENST00000377270 ZNF432O94892 652 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 IL6RP08887 468 aaPredicted RBP13.93□□□□□ -0.18
FXN-201ENST00000377270 LSSP48449 732 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 DECR1Q16698 335 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 ATP6V1FQ16864 119 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 RPTNQ6XPR3 784 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 ZNF836Q6ZNA1 936 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 TMED6Q8WW62 240 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 GHSRQ92847 366 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 SDF2Q99470 211 aa13.93□□□□□ -0.18
FXN-201ENST00000377270 EYSQ5T1H1 3165 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 CENPVL1A0A0U1RR11 272 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 ADAP1O75689 374 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 AHSA1O95433 338 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 YPEL5P62699 121 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 UBE2V2Q15819 145 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 ZNF542PQ5EBM4 170 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 OR2T2Q6IF00 324 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 MEPCEQ7L2J0 689 aaKnown RBP13.92□□□□□ -0.18
FXN-201ENST00000377270 OR2T33Q8NG76 320 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 OR13H1Q8NG92 308 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 NKX3-1Q99801 234 aaPredicted RBP13.92□□□□□ -0.18
FXN-201ENST00000377270 TCEAL2Q9H3H9 227 aaPredicted RBP13.92□□□□□ -0.18
FXN-201ENST00000377270 LMAN1LQ9HAT1 526 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 INPP5EQ9NRR6 644 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 POT1Q9NUX5 634 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 HRASLS2Q9NWW9 162 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 AK6Q9Y3D8 172 aaKnown RBP13.92□□□□□ -0.18
FXN-201ENST00000377270 MTCH2Q9Y6C9 303 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 SLCO1B1Q9Y6L6 691 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 FANCMQ8IYD8 2048 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 KNL1Q8NG31 2342 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 J3QLW9 94 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 ZNF19P17023 458 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 CASRP41180 1078 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 DMKNQ6E0U4 476 aaPredicted RBP13.92□□□□□ -0.18
FXN-201ENST00000377270 NIPAL3Q6P499 406 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 TMPPEQ6ZT21 453 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 BEST3Q8N1M1 668 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 HPSE2Q8WWQ2 592 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 C4orf36Q96KX1 117 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 YPEL4Q96NS1 127 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 MYOTQ9UBF9 498 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 SLC7A7Q9UM01 511 aa13.92□□□□□ -0.18
FXN-201ENST00000377270 ARL6IP5O75915 188 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 RPP14O95059 124 aaKnown RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 OR2C1O95371 312 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 TNFP01375 233 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 ST6GAL1P15907 406 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 GABRG2P18507 467 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 NT5EP21589 574 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 KLF3P57682 345 aaPredicted RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 EIF5AP63241 154 aaKnown RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 RASGEF1BQ0VAM2 473 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 LRRC37A5PQ49AS3 106 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 MBOAT2Q6ZWT7 520 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 P4HA3Q7Z4N8 544 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 TMEM52Q8NDY8 209 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 TAAR8Q969N4 342 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 ALKBH7Q9BT30 221 aaPredicted RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 C19orf53Q9UNZ5 99 aaPredicted RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 TMED3Q9Y3Q3 217 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 KCNAB3O43448 404 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 FGF17O60258 216 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 HLA-GP17693 338 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 PTH2RP49190 550 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 HMGN3Q15651 99 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 ACOT7LQ6ZUV0 252 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 OVCH1Q7RTY7 1134 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 ZNF761Q86XN6 746 aaPredicted RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 OR5AP2Q8NGF4 316 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 BAHD1Q8TBE0 780 aaPredicted RBP13.91□□□□□ -0.18
FXN-201ENST00000377270 HLA-CQ95604 372 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 DERL3Q96Q80 235 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 MICU1Q9BPX6 476 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 LYRM4Q9HD34 91 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 STARD5Q9NSY2 213 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 SPACA6W5XKT8 324 aa13.91□□□□□ -0.18
FXN-201ENST00000377270 SEMA4FO95754 770 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 IFNA6P05013 189 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 MMP7P09237 267 aaPredicted RBP13.9□□□□□ -0.18
FXN-201ENST00000377270 OR4A8P0C604 315 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 FAM157CP0CG43 387 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 HKR1P10072 659 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 CD1CP29017 333 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 P2RX1P51575 399 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 DUSP8Q13202 625 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 HAGHQ16775 308 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 TEX38Q6PEX7 206 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 ZNF705AQ6ZN79 300 aaPredicted RBP13.9□□□□□ -0.18
FXN-201ENST00000377270 SLC35E3Q7Z769 313 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 OR4S1Q8NGB4 309 aa13.9□□□□□ -0.18
FXN-201ENST00000377270 HAS2Q92819 552 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms