RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 NOX4Q9NPH5 578 aa15.4■□□□□ 0.06
HDAC6-202ENST00000376610 MAGEL2Q9UJ55 1249 aa15.4■□□□□ 0.06
HDAC6-202ENST00000376610 SOX21Q9Y651 276 aaPredicted RBP15.4■□□□□ 0.06
HDAC6-202ENST00000376610 MDFIC2A0A1B0GVS7 189 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 OR6C68A6NDL8 312 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 GGT3PA6NGU5 568 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 CD300LBA8K4G0 201 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 GMDSO60547 372 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 FABP3P05413 133 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 LIPFP07098 398 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 MDKP21741 143 aaPredicted RBP15.39■□□□□ 0.05
HDAC6-202ENST00000376610 PRDX6P30041 224 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 PSMB10P40306 273 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.39■□□□□ 0.05
HDAC6-202ENST00000376610 MZT1Q08AG7 82 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 OR8B8Q15620 311 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 DEFB112Q30KQ8 113 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 CLEC12AQ5QGZ9 265 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 C17orf107Q6ZR85 190 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 BOLLQ8N9W6 283 aaKnown RBP15.39■□□□□ 0.05
HDAC6-202ENST00000376610 PLPP7Q8NBV4 271 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 C19orf18Q8NEA5 215 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 PROKR2Q8NFJ6 384 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 GNPDA2Q8TDQ7 276 aa15.39■□□□□ 0.05
HDAC6-202ENST00000376610 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP15.38■□□□□ 0.05
HDAC6-202ENST00000376610 SRRM5B3KS81 715 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 LGALS8O00214 317 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 P2RY10O00398 339 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 KCNAB3O43448 404 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 NDUFA2O43678 99 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 OMGP23515 440 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 TSPAN31Q12999 210 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 MPPED2Q15777 294 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 SLC35F1Q5T1Q4 408 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 RPL13AP3Q6NVV1 102 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 ZNF841Q6ZN19 808 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 ZNF620Q6ZNG0 422 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 NAA40Q86UY6 237 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 PNLDC1Q8NA58 520 aaKnown RBP15.38■□□□□ 0.05
HDAC6-202ENST00000376610 SPERTQ8NA61 448 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 OR2T4Q8NH00 348 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 OR4F5Q8NH21 305 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 NSMCE2Q96MF7 247 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 BEX1Q9HBH7 125 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 PNRC2Q9NPJ4 139 aaKnown RBP15.38■□□□□ 0.05
HDAC6-202ENST00000376610 TNFRSF19Q9NS68 423 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 MMP24Q9Y5R2 645 aa15.38■□□□□ 0.05
HDAC6-202ENST00000376610 TRAV38-1A0A0B4J264 116 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 FAM181BA6NEQ2 426 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 ZNF879B4DU55 563 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 C22orf46C9J442 243 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 C3orf80F5H4A9 247 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 ADAM20O43506 726 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 TOX4O94842 621 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 KNG1P01042 644 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 RRM2P31350 389 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 GSSP48637 474 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 DBPQ10586 325 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-202ENST00000376610 TAF13Q15543 124 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 METTL11BQ5VVY1 283 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 SFRP4Q6FHJ7 346 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-202ENST00000376610 DRAM2Q6UX65 266 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 TMEM86BQ8N661 226 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 GATAD2BQ8WXI9 593 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 MAP6Q96JE9 813 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 FAM71F1Q96KD3 344 aaPredicted RBP15.37■□□□□ 0.05
HDAC6-202ENST00000376610 COPS4Q9BT78 406 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 PRDM13Q9H4Q3 707 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 OPA3Q9H6K4 179 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 MED4Q9NPJ6 270 aa15.37■□□□□ 0.05
HDAC6-202ENST00000376610 MRPL22Q9NWU5 206 aaKnown RBP15.37■□□□□ 0.05
HDAC6-202ENST00000376610 MRPL15Q9P015 296 aaKnown RBP15.37■□□□□ 0.05
HDAC6-202ENST00000376610 SEMG1P04279 462 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 CFHR2P36980 270 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 RAG2P55895 527 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 ZNF92Q03936 586 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 SAMD4BQ5PRF9 694 aaKnown RBP15.36■□□□□ 0.05
HDAC6-202ENST00000376610 FIP1L1Q6UN15 594 aaKnown RBP15.36■□□□□ 0.05
HDAC6-202ENST00000376610 OR2AE1Q8NHA4 323 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 TAF15Q92804 592 aaKnown RBP eCLIP15.36■□□□□ 0.055e-10■□□□□ 10.5
HDAC6-202ENST00000376610 ELAC2Q9BQ52 826 aaKnown RBP15.36■□□□□ 0.05
HDAC6-202ENST00000376610 MYLK2Q9H1R3 596 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 MARCH7Q9H992 704 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 C14orf119Q9NWQ9 140 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 C1orf123Q9NWV4 160 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 CDH10Q9Y6N8 788 aa15.36■□□□□ 0.05
HDAC6-202ENST00000376610 hCG_1807616A0A1W2PRN6 198 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 OOEPA6NGQ2 149 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 A6NLC8 198 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 KRT36O76013 467 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 PTBP3O95758 552 aaKnown RBP15.35■□□□□ 0.05
HDAC6-202ENST00000376610 HSD17B1P14061 328 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 PYCR1P32322 319 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 SNAI3Q3KNW1 292 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 PGBD2Q6P3X8 592 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 Q6YL49 198 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 LINC00471Q8N535 108 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 CYB561A3Q8NBI2 242 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 TRIM15Q9C019 465 aa15.35■□□□□ 0.05
HDAC6-202ENST00000376610 IL1RAPQ9NPH3 570 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms