RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 CENPMQ9NSP4 180 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 SRPK3Q9UPE1 567 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 MTCH2Q9Y6C9 303 aa9.47□□□□□ -0.89
ABCF1-202ENST00000376545 VSTM2BA6NLU5 285 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 EIF1AYO14602 144 aaKnown RBP9.46□□□□□ -0.89
ABCF1-202ENST00000376545 TOX3O15405 576 aaPredicted RBP9.46□□□□□ -0.89
ABCF1-202ENST00000376545 ZNF17P17021 662 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 HRH1P35367 487 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 EIF1AXP47813 144 aaKnown RBP9.46□□□□□ -0.89
ABCF1-202ENST00000376545 NKPD1Q17RQ9 610 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 OR52W1Q6IF63 320 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 SLC25A47Q6Q0C1 308 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 OR5AS1Q8N127 324 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 LILRB2Q8N423 598 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 FBXW5Q969U6 566 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 PHB2Q99623 299 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 MESP1Q9BRJ9 268 aa9.46□□□□□ -0.89
ABCF1-202ENST00000376545 MS4A7Q9GZW8 240 aaPredicted RBP9.46□□□□□ -0.89
ABCF1-202ENST00000376545 PNRC2Q9NPJ4 139 aaKnown RBP9.46□□□□□ -0.89
ABCF1-202ENST00000376545 KANTRA0A1W2PQU2 76 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 F8VVB4 439 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 F8VWA3 439 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 DKK1O94907 266 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 GNB3P16520 340 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 FOXL2P58012 376 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 EIF3IQ13347 325 aaKnown RBP9.46□□□□□ -0.9
ABCF1-202ENST00000376545 KLHL24Q6TFL4 600 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 ADAD2Q8NCV1 583 aaKnown RBP9.46□□□□□ -0.9
ABCF1-202ENST00000376545 OR10K1Q8NGX5 313 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 NUDCD2Q8WVJ2 157 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 ZC3H10Q96K80 434 aaKnown RBP9.46□□□□□ -0.9
ABCF1-202ENST00000376545 FAM117AQ9C073 453 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 COMMD9Q9P000 198 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 MYO15AQ9UKN7 3530 aa9.46□□□□□ -0.9
ABCF1-202ENST00000376545 A0A1B0GW55 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 LINC01387J3KSC0 135 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 CCSO14618 274 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 WDPCPO95876 746 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 GP1BAP07359 652 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 ERCC1P07992 297 aaPredicted RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 GSTP1P09211 210 aaKnown RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4L2P0CJ85 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4L3P0CJ86 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4L4P0CJ87 422 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4L5P0CJ88 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4L6P0CJ89 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4L7P0CJ90 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 CNR1P21554 472 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 IL13RA1P78552 427 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 MYBPHQ13203 477 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 VAX1Q5SQQ9 334 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 PTCRAQ6ISU1 281 aaPredicted RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 SLC38A9Q8NBW4 561 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 NOXO1Q8NFA2 376 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 OR10H5Q8NGA6 315 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 STOML3Q8TAV4 291 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 RELTQ969Z4 430 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 EMC6Q9BV81 110 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DUX4Q9UBX2 424 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 VDAC3Q9Y277 283 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 SEC16AO15027 2179 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 LOC102725191A0A1B0GVB3 256 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 ZNF878C9JN71 531 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 TRAF3IP2O43734 574 aaPredicted RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 IGLV3-1P01715 115 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 ZNF93P35789 620 aaPredicted RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 TAF13Q15543 124 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 INPP5JQ15735 1006 aaPredicted RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 PAN3Q58A45 887 aaKnown RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 SHISA6Q6ZSJ9 500 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 RNF144BQ7Z419 303 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 RTN4RL2Q86UN3 420 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 ANGPTL5Q86XS5 388 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 TMEM185AQ8NFB2 350 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 DNASE2BQ8WZ79 361 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 NKD1Q969G9 470 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 SEC22AQ96IW7 307 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 NMES1Q9C002 83 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 TMEM185BQ9H7F4 350 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 MPTX1A8MV57 137 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 FGF16O43320 207 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 LYL1P12980 280 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 CTSSP25774 331 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 CBX5P45973 191 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 LUMP51884 338 aaPredicted RBP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 PLAC9Q5JTB6 97 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 CRIP3Q6Q6R5 217 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 PGAP1Q75T13 922 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 NAA40Q86UY6 237 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 C5orf34Q96MH7 638 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 ZNF75AQ96N20 296 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 OCSTAMPQ9BR26 566 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 GAREM1Q9H706 876 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.45□□□□□ -0.9
ABCF1-202ENST00000376545 GPR132Q9UNW8 380 aa9.45□□□□□ -0.9
ABCF1-202ENST00000376545 BRWD1Q9NSI6 2320 aa9.44□□□□□ -0.9
ABCF1-202ENST00000376545 A0A0B4J2A0 478 aa9.44□□□□□ -0.9
ABCF1-202ENST00000376545 FOXI3A8MTJ6 420 aaPredicted RBP9.44□□□□□ -0.9
ABCF1-202ENST00000376545 CSN2P05814 226 aa9.44□□□□□ -0.9
ABCF1-202ENST00000376545 CRHP06850 196 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms