RNA–Protein interactions for RNA: ENST00000375820.8

COL4A1-201, Transcript of collagen type IV alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A1, Length 6,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-201ENST00000375820 NDRG4Q9ULP0 352 aaKnown RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 CST5P28325 142 aaPredicted RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF77Q15935 545 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ACSM6Q6P461 480 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ACOT7LQ6ZUV0 252 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF251Q9BRH9 671 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 TMPRSS13Q9BYE2 586 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 RCL1Q9Y2P8 373 aaKnown RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 CBY3A6NI87 242 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 TMEM200CA6NKL6 621 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ADAM10O14672 748 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 EIF4E2O60573 245 aaKnown RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 CRYAAP02489 173 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 RBP4P02753 201 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 NME1P15531 152 aaKnown RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 HTRA4P83105 476 aaPredicted RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ERHP84090 104 aaKnown RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 TMEM267Q0VDI3 215 aaPredicted RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF528Q3MIS6 628 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 SYT6Q5T7P8 510 aaPredicted RBP12.43□□□□□ -0.42
COL4A1-201ENST00000375820 LHX4Q969G2 390 aa12.43□□□□□ -0.42
COL4A1-201ENST00000375820 FABP1P07148 127 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 RPL12P30050 165 aaKnown RBP12.42□□□□□ -0.42
COL4A1-201ENST00000375820 CD276Q5ZPR3 534 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 TMPRSS11FQ6ZWK6 438 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 CPEB3Q8NE35 698 aaKnown RBP12.42□□□□□ -0.42
COL4A1-201ENST00000375820 MOB3AQ96BX8 217 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 MYEOVQ96EZ4 313 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 RHNO1Q9BSD3 238 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 OR51I2Q9H344 312 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 AKAP12Q02952 1782 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ETV6P41212 452 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 C20orf196Q8IYI0 205 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ZDHHC23Q8IYP9 409 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF785A8K8V0 405 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 LALBAP00709 142 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 RNF224P0DH78 156 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 CLN3Q13286 438 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 PCK2Q16822 640 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 FAM27D1Q5T7N8 215 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 SRRQ9GZT4 340 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 NAGKQ9UJ70 344 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 FBXL4Q9UKA2 621 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF320A2RRD8 509 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 GPX2P18283 190 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 DCTDP32321 178 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ACTR3CQ9C0K3 210 aaPredicted RBP12.42□□□□□ -0.42
COL4A1-201ENST00000375820 FBXO4Q9UKT5 387 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ST3GAL6Q9Y274 331 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 A0A1W2PPQ1 181 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 CDC14BO60729 498 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ZDHHC11BP0C7U3 371 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 CD22P20273 847 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 THEM4Q5T1C6 240 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 NDFIP1Q9BT67 221 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 MSL2Q9HCI7 577 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 SLC25A37Q9NYZ2 338 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 A4GNTQ9UNA3 340 aa12.42□□□□□ -0.42
COL4A1-201ENST00000375820 C19orf53Q9UNZ5 99 aaPredicted RBP12.42□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF195O14628 629 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 FAHP16930 419 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ADRA2CP18825 462 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ARR3P36575 388 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 STUMQ69YW2 141 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 OR4S1Q8NGB4 309 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 POLDIP2Q9Y2S7 368 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 NPTNQ9Y639 398 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 RFPL4AA6NLU0 287 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 RFPL4AL1F8VTS6 287 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 VAMP3Q15836 100 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 TOX2Q96NM4 488 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF391Q9UJN7 358 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 STRAPQ9Y3F4 350 aaKnown RBP12.41□□□□□ -0.42
COL4A1-201ENST00000375820 TCTN3Q6NUS6 607 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 PTRH1Q86Y79 214 aaKnown RBP12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ZBTB44Q8NCP5 570 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 OR5AP2Q8NGF4 316 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 LOC102723971A0A1B0GUV8 181 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 CHRM2P08172 466 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 GAMTQ14353 236 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ACOT6Q3I5F7 207 aaPredicted RBP12.41□□□□□ -0.42
COL4A1-201ENST00000375820 SLC25A35Q3KQZ1 300 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 UBE3DQ7Z6J8 389 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ARHGEF39Q8N4T4 335 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 P4HTMQ9NXG6 502 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 DOT1LQ8TEK3 1739 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 PRSS37A4D1T9 235 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ABLIM3O94929 683 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ETHE1O95571 254 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ZGLP1P0C6A0 271 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 RPS23P62266 143 aaKnown RBP12.41□□□□□ -0.42
COL4A1-201ENST00000375820 RTL10Q7L3V2 364 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 ZNF784Q8NCA9 323 aaPredicted RBP12.41□□□□□ -0.42
COL4A1-201ENST00000375820 MISP3Q96FF7 219 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 SMIM7Q9BQ49 75 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 TNFRSF12AQ9NP84 129 aa12.41□□□□□ -0.42
COL4A1-201ENST00000375820 A0A1W2PRD5 423 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 A0A1W2PRF3 423 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 A0A1W2PRM7 423 aa12.4□□□□□ -0.42
COL4A1-201ENST00000375820 SLC22A20A6NK97 555 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms