RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 DPPA2Q7Z7J5 298 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 NAA40Q86UY6 237 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ADAD2Q8NCV1 583 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MMP25Q9NPA2 562 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 NLRC5Q86WI3 1866 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ATG12O94817 140 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 WNT11O96014 354 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 DRD3P35462 400 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 APOBEC1P41238 236 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MLF1P58340 268 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MRPL49Q13405 166 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ELAVL1Q15717 326 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MESTQ5EB52 335 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LYSMD4Q5XG99 296 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LPCAT3Q6P1A2 487 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MISPQ8IVT2 679 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SFTPA2Q8IWL1 248 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 C20orf196Q8IYI0 205 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ZSCAN4Q8NAM6 433 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM52Q8NDY8 209 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 PTP4A1Q93096 173 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LHX9Q9NQ69 397 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 BAXQ07812 192 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MFAP5Q13361 173 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 HMGN3Q15651 99 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 CST9LP1Q5W188 147 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LRRTM1Q86UE6 522 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 EXD3Q8N9H8 876 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MS4A3Q96HJ5 214 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 AK3Q9UIJ7 227 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SRPK3Q9UPE1 567 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MBTPS2O43462 519 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LRP3O75074 770 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 GLRA1P23415 457 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 CARD18P57730 90 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 OR5AS1Q8N127 324 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM123Q8N131 208 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 FBXW5Q969U6 566 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 OCSTAMPQ9BR26 566 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 OBP2AQ9NY56 170 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ST6GALNAC2Q9UJ37 374 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 GREM1O60565 184 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 EIF4E2O60573 245 aaKnown RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 ONECUT2O95948 504 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 IGKV1D-16P01601 117 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 TK1P04183 234 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 LAP3P28838 519 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 BPHLQ86WA6 291 aaPredicted RBP5.89□□□□□ -1.47
SMC1A-202ENST00000375340 PPP1R3BQ86XI6 285 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SPICQ8N5J4 248 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 OR13C8Q8NGS7 320 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 RNF128Q8TEB7 428 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 TGIF2Q9GZN2 237 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 MAGT1Q9H0U3 335 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 SPTBP11277 2137 aa5.89□□□□□ -1.47
SMC1A-202ENST00000375340 CD96P40200 585 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 IDH3GP51553 393 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 ZNF133P52736 654 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TFF2Q03403 129 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 TMEM164Q5U3C3 297 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 YRDCQ86U90 279 aaKnown RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CDC20BQ86Y33 519 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 MRPL41Q8IXM3 137 aaKnown RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SEMA6DQ8NFY4 1073 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PSMF1Q92530 271 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 OR2A5Q96R48 311 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CDH20Q9HBT6 801 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SUSD2Q9UGT4 822 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 NSG1A0A0A6YYJ2 146 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 C9orf170A2RU37 121 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CEBPZOSA8MTT3 80 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 DDAH2O95865 285 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CXCL2P19875 107 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SPINK2P20155 84 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PRSS12P56730 875 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 DHRS2Q13268 280 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 BRICD5Q6PL45 260 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 FAM122BQ7Z309 247 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PRSS35Q8N3Z0 413 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 OR52N4Q8NGI2 321 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 OR4C3Q8NH37 302 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 LRRC3BQ96PB8 259 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SPIN2AQ99865 258 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SPIN2BQ9BPZ2 258 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 FGF21Q9NSA1 209 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PPP1R3CQ9UQK1 317 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SERPINA7P05543 415 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 UBE2NP61088 152 aaKnown RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 LILRA6Q6PI73 481 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 GALNT16Q8N428 558 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 NPEPL1Q8NDH3 523 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 HPSE2Q8WWQ2 592 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CCNL2Q96S94 520 aaPredicted RBP5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CHST6Q9GZX3 395 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CNTD2Q9H8S5 307 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 PTPRDP23468 1912 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 CYB5BO43169 146 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SIGLEC6O43699 453 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 IL5P05113 134 aa5.88□□□□□ -1.47
SMC1A-202ENST00000375340 SULT1A3P0DMM9 295 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms