RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 TAF9BQ9HBM6 251 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 C19orf12Q9NSK7 152 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 VSX1Q9NZR4 365 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 TRAV27A0A087WT01 109 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 KIR2DS5A0A0G2JLQ3 304 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 A0A0G2JNG1 304 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 UMAD1C9J7I0 102 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 KIR2DS3K7RE56 304 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 PRKNO60260 465 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 CLEC3AO75596 197 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR8U9P0C7N5 309 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 SERPINF1P36955 418 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 AFF3P51826 1226 aaKnown RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 KIR2DS3Q14952 304 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 KIR2DS5Q14953 304 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF674Q2M3X9 581 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 KHDC3LQ587J8 217 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ARHGAP40Q5TG30 622 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF385CQ66K41 422 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 BEND2Q8NDZ0 799 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR52E2Q8NGJ4 325 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR51L1Q8NGJ5 315 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR13C8Q8NGS7 320 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR8U1Q8NH10 309 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF417Q8TAU3 575 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 CD300LFQ8TDQ1 290 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 GALNT14Q96FL9 552 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 PRRT1Q99946 306 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ZFYVE21Q9BQ24 234 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 GPR61Q9BZJ8 451 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 CST11Q9H112 138 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 PRDM7Q9NQW5 492 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ICAM5Q9UMF0 924 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 VSIG4Q9Y279 399 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF443Q9Y2A4 671 aaPredicted RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 COL4A2P08572 1712 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 BRINP1O60477 761 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 ALOX12BO75342 701 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 RAB6AP20340 208 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 SLC6A6P31641 620 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 HSD17B7P56937 341 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 NANOS3P60323 173 aaKnown RBP10.89□□□□□ -0.67
C9orf3-203ENST00000375315 GGTLC2Q14390 218 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 MEF2DQ14814 521 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 LYSMD4Q5XG99 296 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 TTLL10Q6ZVT0 673 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 CSNK1A1LQ8N752 337 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 OR5AK2Q8NH90 309 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 SPOCK3Q9BQ16 436 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 MED31Q9Y3C7 131 aa10.89□□□□□ -0.67
C9orf3-203ENST00000375315 CSN2P05814 226 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF735P0CB33 412 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 MPZP25189 248 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 HTR2CP28335 458 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 ARL4DP49703 201 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 NXPH1P58417 271 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 MESTQ5EB52 335 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 FAHD2BQ6P2I3 314 aaPredicted RBP10.88□□□□□ -0.67
C9orf3-203ENST00000375315 BIVMQ86UB2 503 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 UBALD2Q8IYN6 164 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 HIST3H2BBQ8N257 126 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 SLC25A45Q8N413 288 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 RCBTB1Q8NDN9 531 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 OR9A2Q8NGT5 310 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 SEH1LQ96EE3 360 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 FAHD2AQ96GK7 314 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 OR2A5Q96R48 311 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 SLC17A5Q9NRA2 495 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 SIRT7Q9NRC8 400 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 A8MWP6 167 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 RPL36A-HNRNPH2H7BZ11 118 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 TAAR5O14804 337 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 ADAP1O75689 374 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 GLCEO94923 617 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 PTBP3O95758 552 aaKnown RBP10.88□□□□□ -0.67
C9orf3-203ENST00000375315 ZXDAP98168 799 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 RUNX2Q13950 521 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 EIPR1Q53HC9 387 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 FAM220AQ7Z4H9 259 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 ZDHHC22Q8N966 263 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 MFSD9Q8NBP5 474 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 MR1Q95460 341 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 POM121Q96HA1 1249 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 AQP10Q96PS8 301 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 KCNJ16Q9NPI9 418 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 ZNF107Q9UII5 783 aaPredicted RBP10.88□□□□□ -0.67
C9orf3-203ENST00000375315 HDGFL3Q9Y3E1 203 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 AHCTF1Q8WYP5 2266 aa10.88□□□□□ -0.67
C9orf3-203ENST00000375315 IGHV5-51A0A0C4DH38 117 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 PIAS2O75928 621 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 SPARCP09486 303 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 TACSTD2P09758 323 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 FGF7P21781 194 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 TACR3P29371 465 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 RPS23P62266 143 aaKnown RBP10.87□□□□□ -0.67
C9orf3-203ENST00000375315 GUK1Q16774 197 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 PDZD11Q5EBL8 140 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 AKR1C8PQ5T2L2 129 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 PRSS54Q6PEW0 395 aa10.87□□□□□ -0.67
C9orf3-203ENST00000375315 NPSR1Q6W5P4 371 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms