RNA–Protein interactions for RNA: ENST00000374253.9

CNKSR1-202, Transcript of connector enhancer of kinase suppressor of Ras 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNKSR1, Length 2,538 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR1-202ENST00000374253 WIPI1Q5MNZ9 446 aaPredicted RBP14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 C6orf15Q6UXA7 325 aaPredicted RBP14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 IDO2Q6ZQW0 420 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 TMEM104Q8NE00 496 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 BANF2Q9H503 90 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 DEPPQ9NTK1 212 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 TAS2R8Q9NYW2 309 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 PIPOXQ9P0Z9 390 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 RAB27BO00194 218 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 CBR3O75828 277 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 JMJD7P0C870 316 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 GUCA1AP43080 201 aaPredicted RBP14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 TSPAN5P62079 268 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 CLPPQ16740 277 aaPredicted RBP14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 C4orf46Q504U0 113 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 SEZ6L2Q6UXD5 910 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 FJX1Q86VR8 437 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 BEST3Q8N1M1 668 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 MUC20Q8N307 709 aaPredicted RBP14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 SLC22A24Q8N4F4 322 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 ZIC4Q8N9L1 334 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 FOXJ2Q9P0K8 574 aa14.09□□□□□ -0.15
CNKSR1-202ENST00000374253 PINLYPA6NC86 204 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 CYB5AP00167 134 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 HCKP08631 526 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 PATE4P0C8F1 98 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 SPINK14Q6IE38 97 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 SLC36A1Q7Z2H8 476 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 HDDC2Q7Z4H3 204 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 SELENOIQ9C0D9 397 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 POFUT1Q9H488 388 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 P4HTMQ9NXG6 502 aa14.08□□□□□ -0.15
CNKSR1-202ENST00000374253 ZFHX4Q86UP3 3567 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 A0A1W2PNU3 283 aaPredicted RBP14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 B4E171 279 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 CD37P11049 281 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 MSR1P21757 451 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 TSPAN7P41732 249 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 ACTBP60709 375 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 ACTG1P63261 375 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 ENDOGQ14249 297 aaKnown RBP14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 ANGPT1Q15389 498 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 CDNFQ49AH0 187 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 ACER2Q5QJU3 275 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 GLIPR1L1Q6UWM5 242 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 TRAPPC6BQ86SZ2 158 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 OR5AS1Q8N127 324 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 PGAM5Q96HS1 289 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 GPR137Q96N19 417 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 PIGQQ9BRB3 760 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 TRAF4Q9BUZ4 470 aaPredicted RBP14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 GPN1Q9HCN4 374 aaPredicted RBP14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 NPTNQ9Y639 398 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 MED13Q9UHV7 2174 aa14.08□□□□□ -0.16
CNKSR1-202ENST00000374253 CACNA1HO95180 2353 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 EP300Q09472 2414 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF736B4DX44 427 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 MPIG6BO95866 241 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 GP1BAP07359 652 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 SUCLG1P53597 346 aaKnown RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 PER3P56645 1201 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 H2BFSP57053 126 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 TAS2R19P59542 299 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 RAC1P63000 192 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 DCAF12L2Q5VW00 463 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 TMEM123Q8N131 208 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 LYZL4Q96KX0 146 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 ALKBH3Q96Q83 286 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 GPER1Q99527 375 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 ULBP2Q9BZM5 246 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 FBXO4Q9UKT5 387 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 DNAJC13O75165 2243 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF407Q9C0G0 2248 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 METTL21EPA6NDL7 271 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 C9orf172C9J069 976 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 GOSR2O14653 212 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 CXCL13O43927 109 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 B3GALT5-AS1P59052 145 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 CSNK2A1P68400 391 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF239Q16600 458 aaKnown RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 TNFAIP8L1Q8WVP5 186 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 NABP1Q96AH0 204 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 FOXRED1Q96CU9 486 aaPredicted RBP14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 SLC6A7Q99884 636 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 NELFAQ9H3P2 528 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 HEXA-AS1Q9H8Q6 139 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 RAB22AQ9UL26 194 aa14.07□□□□□ -0.16
CNKSR1-202ENST00000374253 IGKV1-9A0A0C4DH69 117 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 DHHO43323 396 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 EIF1BO60739 113 aaKnown RBP14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 MPC2O95563 127 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 SP9P0CG40 484 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 QRFPP83859 136 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF260Q3ZCT1 412 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 ZNF584Q8IVC4 421 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 OR8H3Q8N146 312 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 BPIFB2Q8N4F0 458 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 FBXO17Q96EF6 278 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 SFXN2Q96NB2 322 aa14.06□□□□□ -0.16
CNKSR1-202ENST00000374253 NAA11Q9BSU3 229 aaPredicted RBP14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms