RNA–Protein interactions for RNA: ENST00000372003.5

TSPAN1-201, Transcript of tetraspanin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN1, Length 1,615 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-201ENST00000372003 LYG2Q86SG7 212 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 INO80EQ8NBZ0 244 aaPredicted RBP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 STK35Q8TDR2 534 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ARL11Q969Q4 196 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC25A28Q96A46 364 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 FER1L6-AS2Q96M78 137 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 VSTM2LQ96N03 204 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 OR8B4Q96RC9 309 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 INTS14Q96SY0 518 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 LPAR4Q99677 370 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 UQCC2Q9BRT2 126 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 PDCD10Q9BUL8 212 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF700Q9H0M5 742 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ATG5Q9H1Y0 275 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 Q9N2J8 555 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 COA4Q9NYJ1 87 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 ZMAT5Q9UDW3 170 aaKnown RBP10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 IKZF2Q9UKS7 526 aa10.21□□□□□ -0.78
TSPAN1-201ENST00000372003 IGKV1D-42A0A075B6H8 117 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 TRBV6-7A0A0A0MS04 114 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ELOA3DA6NLF2 546 aaPredicted RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 C17orf105B2RV13 164 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ZNF736B4DX44 427 aaPredicted RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 F8W036 122 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 BLOC1S5-TXNDC5H3BN57 136 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 SULT2B1O00204 365 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PSMD9O00233 223 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 LDLRAD4O15165 306 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 SCGNO76038 276 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CYB5AP00167 134 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 IGKV1D-16P01601 117 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 AMY2AP04746 511 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CELA2AP08217 269 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ITGA5P08648 1049 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 TPT1P13693 172 aaKnown RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 TBPP20226 339 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ZBTB25P24278 435 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PAX6P26367 422 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CASRP41180 1078 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PPICP45877 212 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CCL11P51671 97 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 EFNB2P52799 333 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CTXN1P60606 82 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 IGLV3-21P80748 117 aaPredicted RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CYCSP99999 105 aaKnown RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PLA2G7Q13093 441 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ELOA3BQ3SY89 546 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 TEX30Q5JUR7 227 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 NKAPLQ5M9Q1 402 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 DCAF10Q5QP82 559 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 RAB12Q6IQ22 244 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 DRAM2Q6UX65 266 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 LDLRAD3Q86YD5 345 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PUSL1Q8N0Z8 303 aaKnown RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PRSS35Q8N3Z0 413 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC30A7Q8NEW0 376 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ELOA3Q8NG57 546 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 MITD1Q8WV92 249 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 RNF141Q8WVD5 230 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 TSEN15Q8WW01 171 aaKnown RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 FOXRED1Q96CU9 486 aaPredicted RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 WDR77Q9BQA1 342 aaPredicted RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 SEC11CQ9BY50 192 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 WDR13Q9H1Z4 485 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 GRHPRQ9UBQ7 328 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 CKLFQ9UBR5 152 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PCDHB10Q9UN67 800 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 NOP16Q9Y3C1 178 aaKnown RBP10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 ZFHX4Q86UP3 3567 aa10.2□□□□□ -0.78
TSPAN1-201ENST00000372003 PCP4L1A6NKN8 68 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 PRSS44E7EML9 344 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC25A12O75746 678 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 CD2P06729 351 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 IGFBP3P17936 291 aaPredicted RBP10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 BDKRB2P30411 391 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 GRPRP30550 384 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 AQP2P41181 271 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 KIR3DL2P43630 455 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 PRKXP51817 358 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 RRADP55042 308 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 ROM1Q03395 351 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 Q0VFX4 171 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 BIKQ13323 160 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 SLC17A1Q14916 467 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 TAF13Q15543 124 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 ELAVL1Q15717 326 aaKnown RBP10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 GUCA2BQ16661 112 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 WDR38Q5JTN6 314 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 FAM74A1Q5RGS3 127 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 ADGRE4PQ86SQ3 457 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 ATG4DQ86TL0 474 aaPredicted RBP10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 GTPBP8Q8N3Z3 284 aaPredicted RBP10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 GALNT16Q8N428 558 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 BPIFB2Q8N4F0 458 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 OR1S2Q8NGQ3 325 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 OR1J2Q8NGS2 313 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 OR6N2Q8NGY6 317 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 OTOSQ8NHW6 89 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 RNF128Q8TEB7 428 aa10.19□□□□□ -0.78
TSPAN1-201ENST00000372003 PTPMT1Q8WUK0 201 aaPredicted RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms