RNA–Protein interactions for RNA: ENST00000371146.5

USP1-202, Transcript of ubiquitin specific peptidase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP1, Length 3,507 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP1-202ENST00000371146 DEFA1P59665 94 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 DEFA3P59666 94 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 GPR50Q13585 617 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 MAD2L1BPQ15013 274 aaPredicted RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 KCNMB1Q16558 191 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 MICBQ29980 383 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 EMC4Q5J8M3 183 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 LRIF1Q5T3J3 769 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 THAP5Q7Z6K1 395 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 TMEM203Q969S6 136 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 WFIKKN1Q96NZ8 548 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 VKORC1Q9BQB6 163 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 PARD6GQ9BYG4 376 aaPredicted RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 NAA50Q9GZZ1 169 aaKnown RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 PROK2Q9HC23 129 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 POLE4Q9NR33 117 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 USE1Q9NZ43 259 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 ERVK-18Q9QC07 812 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 PRPF19Q9UMS4 504 aaKnown RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 COL6A5A8TX70 2615 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 SULT1C2O00338 296 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 CDC42EP2O14613 210 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 CHP2O43745 196 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 NR2C1P13056 603 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 SPNP16150 400 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 SELEP16581 610 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 ACAA2P42765 397 aaKnown RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 LHX2P50458 406 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 MVDP53602 400 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 PRPS1P60891 318 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 ZNF239Q16600 458 aaKnown RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 SFRP4Q6FHJ7 346 aaPredicted RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 MTFR2Q6P444 385 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 CBLL1Q75N03 491 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 BHLHA15Q7RTS1 189 aaPredicted RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 CPEB3Q8NE35 698 aaKnown RBP6.2□□□□□ -1.42
USP1-202ENST00000371146 MIB2Q96AX9 1013 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 ASB9Q96DX5 294 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 COQ10BQ9H8M1 238 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 MCUBQ9NWR8 336 aa6.2□□□□□ -1.42
USP1-202ENST00000371146 TP53BP1Q12888 1972 aaPredicted RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 A0A1W2PNV4 684 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 TO15178 435 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 RER1O15258 196 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 FAM20BO75063 409 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 NDUFS7O75251 213 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 DIRAS3O95661 229 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 GSTP1P09211 210 aaKnown RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 MUC1P15941 1255 aaPredicted RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 CEACAM6P40199 344 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 CLDN18P56856 261 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 RPL13AP3Q6NVV1 102 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 SLC30A8Q8IWU4 369 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ZNF433Q8N7K0 673 aaPredicted RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 YIPF7Q8N8F6 280 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 TMEM171Q8WVE6 324 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 FOXB1Q99853 325 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 OCSTAMPQ9BR26 566 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ASIC5Q9NY37 505 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 TUBD1Q9UJT1 453 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 HDGFL3Q9Y3E1 203 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 A0A075B6Q4 140 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 RPS10-NUDT3A0A1W2PQS6 291 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ANKRD61A6NGH8 418 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 DBHP09172 617 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 H2BFMP0C1H6 154 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 TSPAN19P0C672 248 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 HIST1H1CP16403 213 aaKnown RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 CDH15P55291 814 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 CDC42P60953 191 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 LSM3P62310 102 aaKnown RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 PAQR6Q6TCH4 344 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 LRRN1Q6UXK5 716 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 AHSA2Q719I0 299 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 OR2T33Q8NG76 320 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 OR1J1Q8NGS3 322 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 R3HDM4Q96D70 268 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 PGAM5Q96HS1 289 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 DMRTB1Q96MA1 342 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 DNTTIP1Q9H147 329 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 SH2D2AQ9NP31 389 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 MEPEQ9NQ76 525 aaPredicted RBP6.19□□□□□ -1.42
USP1-202ENST00000371146 NTMQ9P121 344 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 GNG8Q9UK08 70 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 FAM215AQ9Y5M1 114 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ARHGAP32A7KAX9 2087 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 TOXO94900 526 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 EPPINO95925 133 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 CELA3BP08861 270 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 EPHA2P29317 976 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ART1P52961 327 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 MVKQ03426 396 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 GAGE1Q13065 139 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ZNF141Q15928 474 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 DGUOKQ16854 277 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 ZNF774Q6NX45 483 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 TEX261Q6UWH6 196 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 SLC16A13Q7RTY0 426 aa6.19□□□□□ -1.42
USP1-202ENST00000371146 OR5D18Q8NGL1 313 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms