RNA–Protein interactions for RNA: ENST00000368979.6

SNX3-203, Transcript of sorting nexin 3, humanhuman

TSL 2

Gene SNX3, Length 1,537 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-203ENST00000368979 ANKRD61A6NGH8 418 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 NOTOA8MTQ0 251 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 IGFBP3P17936 291 aaPredicted RBP20.76■□□□□ 0.91
SNX3-203ENST00000368979 ADRA2CP18825 462 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 STOMP27105 288 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 OPRM1P35372 400 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 PEX19P40855 299 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 PLP2Q04941 152 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 ZNF474Q6S9Z5 364 aaPredicted RBP20.76■□□□□ 0.91
SNX3-203ENST00000368979 C17orf78Q8N4C9 275 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 PARP16Q8N5Y8 322 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 POM121L2Q96KW2 1035 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 SLC30A2Q9BRI3 323 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 Q9UFV3 132 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 SH3BGRL2Q9UJC5 107 aa20.76■□□□□ 0.91
SNX3-203ENST00000368979 CTDSP2O14595 271 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 GFOD2Q3B7J2 385 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 SLC25A35Q3KQZ1 300 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 COLCA1Q6ZS62 124 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 COMMD2Q86X83 199 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 OR1J2Q8NGS2 313 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 C1QTNF5Q9BXJ0 243 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 AKIP1Q9NQ31 210 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 ZZEF1O43149 2961 aa20.75■□□□□ 0.91
SNX3-203ENST00000368979 PRRC2CQ9Y520 2896 aaKnown RBP20.75■□□□□ 0.91
SNX3-203ENST00000368979 MSTNO14793 375 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 LCATP04180 440 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 ZNF12P17014 697 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 THBS2P35442 1172 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 WDR31Q8NA23 367 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 OR14K1Q8NGZ2 314 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 SGK3Q96BR1 496 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 FGGYQ96C11 551 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 KCTD12Q96CX2 325 aaKnown RBP20.74■□□□□ 0.91
SNX3-203ENST00000368979 ADAT3Q96EY9 351 aaPredicted RBP20.74■□□□□ 0.91
SNX3-203ENST00000368979 WBP1Q96G27 269 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 FAM71F1Q96KD3 344 aaPredicted RBP20.74■□□□□ 0.91
SNX3-203ENST00000368979 PIGMQ9H3S5 423 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 TAS2R4Q9NYW5 299 aa20.74■□□□□ 0.91
SNX3-203ENST00000368979 ZNF629Q9UEG4 869 aaPredicted RBP20.74■□□□□ 0.91
SNX3-203ENST00000368979 TLN1Q9Y490 2541 aaKnown RBP20.74■□□□□ 0.91
SNX3-203ENST00000368979 SERPINA5P05154 406 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 EPXP11678 715 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 S100A5P33763 92 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 IDNKQ5T6J7 187 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 NCCRP1Q6ZVX7 275 aaPredicted RBP20.73■□□□□ 0.91
SNX3-203ENST00000368979 BHLHA15Q7RTS1 189 aaPredicted RBP20.73■□□□□ 0.91
SNX3-203ENST00000368979 CCDC54Q8NEL0 328 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 ACOT12Q8WYK0 555 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 DMRTA2Q96SC8 542 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 VKORC1Q9BQB6 163 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 CKLFQ9UBR5 152 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 V9GYS6 101 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 C5orf49A4QMS7 147 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 MAS1P04201 325 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 BMP4P12644 408 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 ZNF14P17017 642 aaPredicted RBP20.73■□□□□ 0.91
SNX3-203ENST00000368979 HOXC12P31275 282 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 MS4A3Q96HJ5 214 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 OBP2BQ9NPH6 170 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 DAPK2Q9UIK4 370 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 ZNF391Q9UJN7 358 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 V9GY05 133 aa20.73■□□□□ 0.91
SNX3-203ENST00000368979 INTS1Q8N201 2190 aaKnown RBP20.72■□□□□ 0.91
SNX3-203ENST00000368979 A0A1W2PR80 420 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 A8MXE2 369 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 DHRS3O75911 302 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 CCL2P13500 99 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 ATF1P18846 271 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 BMP5P22003 454 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 APLNRP35414 380 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 DYNC1I2Q13409 638 aaKnown RBP20.72■□□□□ 0.91
SNX3-203ENST00000368979 GLYATL3Q5SZD4 288 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 SERPINA12Q8IW75 414 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 MFSD4AQ8N468 514 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 ZFAND2BQ8WV99 257 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 S100ZQ8WXG8 99 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 WDFY2Q96P53 400 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 RGCCQ9H4X1 137 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 CMAHPQ9Y471 501 aa20.72■□□□□ 0.91
SNX3-203ENST00000368979 LOC390937A0A1W2PQ73 354 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 IFITM5A6NNB3 132 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 SLC2A2P11168 524 aaPredicted RBP20.71■□□□□ 0.91
SNX3-203ENST00000368979 DDOSTP39656 456 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 CA7P43166 264 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 ZNF529Q6P280 563 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 MZT2AQ6P582 158 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 MRGPRGQ86SM5 289 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 LAX1Q8IWV1 398 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 SLC30A7Q8NEW0 376 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 OR2AE1Q8NHA4 323 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 REEP6Q96HR9 211 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 MIXL1Q9H2W2 232 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 MEMO1Q9Y316 297 aa20.71■□□□□ 0.91
SNX3-203ENST00000368979 DSPP15924 2871 aaKnown RBP20.7■□□□□ 0.9
SNX3-203ENST00000368979 OR5H1A6NKK0 313 aa20.7■□□□□ 0.9
SNX3-203ENST00000368979 ANXA2P2A6NMY6 339 aa20.7■□□□□ 0.9
SNX3-203ENST00000368979 CLDN25C9JDP6 229 aa20.7■□□□□ 0.9
SNX3-203ENST00000368979 AIPO00170 330 aa20.7■□□□□ 0.9
SNX3-203ENST00000368979 RGS5O15539 181 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms