RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 GNPDA2Q8TDQ7 276 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 SPRYD4Q8WW59 207 aaPredicted RBP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 SPTSSAQ969W0 71 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 TMIGD2Q96BF3 282 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 UFSP2Q9NUQ7 469 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 RNF7Q9UBF6 113 aa13.32□□□□□ -0.28
CKS1B-202ENST00000368436 NOP16Q9Y3C1 178 aaKnown RBP13.32□□□□□ -0.28
CKS1B-202ENST00000368436 CD300LBA8K4G0 201 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 SRRM5B3KS81 715 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 M0R135 149 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 ENSAO43768 121 aaKnown RBP13.31□□□□□ -0.28
CKS1B-202ENST00000368436 GMDSO60547 372 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 ZNF823P16415 610 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 MDKP21741 143 aaPredicted RBP13.31□□□□□ -0.28
CKS1B-202ENST00000368436 CA6P23280 308 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 RRM2P31350 389 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 ZNF92Q03936 586 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 SNAI3Q3KNW1 292 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 HSP90B2PQ58FF3 399 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 SLC35F1Q5T1Q4 408 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 PGBD2Q6P3X8 592 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 ZNF799Q96GE5 643 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 ELAC2Q9BQ52 826 aaKnown RBP13.31□□□□□ -0.28
CKS1B-202ENST00000368436 FN3KRPQ9HA64 309 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 IL1RAPQ9NPH3 570 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 NOX4Q9NPH5 578 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 CTSZQ9UBR2 303 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 CD300AQ9UGN4 299 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 MAGEL2Q9UJ55 1249 aa13.31□□□□□ -0.28
CKS1B-202ENST00000368436 LGALS8O00214 317 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 FABP3P05413 133 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 LIPFP07098 398 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 ANOS1P23352 680 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 HMGA2P52926 109 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 HOXA4Q00056 320 aaPredicted RBP13.3□□□□□ -0.28
CKS1B-202ENST00000368436 KCNJ8Q15842 424 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 ZNF362Q5T0B9 420 aaPredicted RBP13.3□□□□□ -0.28
CKS1B-202ENST00000368436 GPR157Q5UAW9 335 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 CD276Q5ZPR3 534 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 DRAM2Q6UX65 266 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 TREML4Q6UXN2 200 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 Q6YL49 198 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 SPATC1Q76KD6 591 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 ZNRF4Q8WWF5 429 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 ZDHHC16Q969W1 377 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 MCUR1Q96AQ8 359 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 NSRP1Q9H0G5 558 aaKnown RBP13.3□□□□□ -0.28
CKS1B-202ENST00000368436 EGLN3Q9H6Z9 239 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 MED4Q9NPJ6 270 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 ERVK-18Q9QC07 812 aa13.3□□□□□ -0.28
CKS1B-202ENST00000368436 A0A1B0GUS0 222 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 C5orf63A6NC05 138 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 ZNF879B4DU55 563 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 P2RY10O00398 339 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 BHLHE40O14503 412 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 NDUFA2O43678 99 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 SFTPBP07988 381 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 PSKH1P11801 424 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 MMP9P14780 707 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 OMGP23515 440 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 PYCR1P32322 319 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 CFHR2P36980 270 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 RPS27P42677 84 aaKnown RBP13.29□□□□□ -0.28
CKS1B-202ENST00000368436 GLYATL3Q5SZD4 288 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 SFRP4Q6FHJ7 346 aaPredicted RBP13.29□□□□□ -0.28
CKS1B-202ENST00000368436 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 OR2T4Q8NH00 348 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 OR2AE1Q8NHA4 323 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 NSMCE2Q96MF7 247 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 TECTBQ96PL2 329 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 TBX15Q96SF7 602 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 ADAT1Q9BUB4 502 aaKnown RBP13.29□□□□□ -0.28
CKS1B-202ENST00000368436 TRIM36Q9NQ86 728 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 IL20Q9NYY1 176 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
CKS1B-202ENST00000368436 CDH10Q9Y6N8 788 aa13.29□□□□□ -0.28
CKS1B-202ENST00000368436 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 FAM181BA6NEQ2 426 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 GGT3PA6NGU5 568 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 TVP23AA6NH52 213 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 ARPC2O15144 300 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 MSX2P35548 267 aaPredicted RBP13.28□□□□□ -0.28
CKS1B-202ENST00000368436 PCK2Q16822 640 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 SAMD4BQ5PRF9 694 aaKnown RBP13.28□□□□□ -0.28
CKS1B-202ENST00000368436 RUSC1-AS1Q66K80 236 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 PGAM4Q8N0Y7 254 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 TMEM86BQ8N661 226 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 SPERTQ8NA61 448 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 CYB561A3Q8NBI2 242 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 PROKR2Q8NFJ6 384 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 FAM71F1Q96KD3 344 aaPredicted RBP13.28□□□□□ -0.28
CKS1B-202ENST00000368436 PCGF1Q9BSM1 259 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 SMURF1Q9HCE7 757 aa13.28□□□□□ -0.28
CKS1B-202ENST00000368436 CENPVL3A0A0U1RRI6 287 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 OOEPA6NGQ2 149 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 C3orf80F5H4A9 247 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 ADAM20O43506 726 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 KRT36O76013 467 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 TOX4O94842 621 aa13.27□□□□□ -0.29
CKS1B-202ENST00000368436 LHBP01229 141 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms