RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 HAO2Q9NYQ3 351 aa19.02■□□□□ 0.64
ECHDC1-203ENST00000368291 ZNF319Q9P2F9 582 aa19.02■□□□□ 0.64
ECHDC1-203ENST00000368291 LAMP5Q9UJQ1 280 aa19.02■□□□□ 0.64
ECHDC1-203ENST00000368291 ORC6Q9Y5N6 252 aa19.02■□□□□ 0.64
ECHDC1-203ENST00000368291 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP19.02■□□□□ 0.645e-8■■■■■ 27.8
ECHDC1-203ENST00000368291 ZFHX3Q15911 3703 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 LRP5LA4QPB2 252 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 H0YL77 283 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 MLNRO43193 412 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 RBMXP38159 391 aaKnown RBP19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 TMEM33P57088 247 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 ZNF121P58317 390 aaPredicted RBP19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 ZBTB49Q6ZSB9 765 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 MRPL21Q7Z2W9 205 aaKnown RBP19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 GID4Q8IVV7 300 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 RFLNBQ8N5W9 214 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 FAM81AQ8TBF8 368 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 STMN2Q93045 179 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 SPSB4Q96A44 273 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 DNAJC27Q9NZQ0 273 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 N6AMT1Q9Y5N5 214 aa19.01■□□□□ 0.63
ECHDC1-203ENST00000368291 WNT9BO14905 357 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 CD5LO43866 347 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 IGHV4-31P0DP07 118 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 SELEP16581 610 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 GPR6P46095 362 aaPredicted RBP19■□□□□ 0.63
ECHDC1-203ENST00000368291 CDC42P60953 191 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 EME1Q96AY2 570 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 CNN2Q99439 309 aaKnown RBP19■□□□□ 0.63
ECHDC1-203ENST00000368291 SOX7Q9BT81 388 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 EGLN1Q9GZT9 426 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 TREM2Q9NZC2 230 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 LRP12Q9Y561 859 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 HIVEP2P31629 2446 aa19■□□□□ 0.63
ECHDC1-203ENST00000368291 PSMD9O00233 223 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 APOC1P02654 83 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 ANXA2P07355 339 aaKnown RBP18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 SBK2P0C263 348 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 IL2RGP31785 369 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 FAM57BQ71RH2 274 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 OR10AD1Q8NGE0 317 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 OR13G1Q8NGZ3 307 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 ITLN1Q8WWA0 313 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 SGK3Q96BR1 496 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 IL19Q9UHD0 177 aa18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 SETD2Q9BYW2 2564 aaPredicted RBP18.99■□□□□ 0.63
ECHDC1-203ENST00000368291 CD300LBA8K4G0 201 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 TBX1O43435 398 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 PPIHO43447 177 aaKnown RBP18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 XRCC2O43543 280 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 HTR1FP30939 366 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 HFEQ30201 348 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 KRT77Q7Z794 578 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 SLC35F2Q8IXU6 374 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 TRUB1Q8WWH5 349 aaKnown RBP18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 OR2V2Q96R30 315 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 TTTY10Q9BZA0 68 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 BRD7Q9NPI1 651 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 TMEM100Q9NV29 134 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 DCAF16Q9NXF7 216 aa18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 WARS2Q9UGM6 360 aaKnown RBP18.98■□□□□ 0.63
ECHDC1-203ENST00000368291 DLGAP1O14490 977 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 HLA-DPB1P04440 258 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 ANPEPP15144 967 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 TNFSF4P23510 183 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 PSMA6P60900 246 aaKnown RBP18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 ROM1Q03395 351 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 DEGS2Q6QHC5 323 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 CCL17Q92583 94 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 OR8B4Q96RC9 309 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 NIPAL2Q9H841 368 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 TMEM14AQ9Y6G1 99 aa18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 SONP18583 2426 aaKnown RBP18.97■□□□□ 0.63
ECHDC1-203ENST00000368291 F5H5P2 479 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 CHN2P52757 468 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 CXCR4P61073 352 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 SNRPGP62308 76 aaKnown RBP18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 FAM3AP98173 230 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 RCN1Q15293 331 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 SLC25A30Q5SVS4 291 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 KCTD18Q6PI47 426 aaPredicted RBP18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 ZNF679Q8IYX0 411 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 OR56B2PQ8NGI1 322 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 OR52H1Q8NGJ2 320 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 OR51G2Q8NGK0 314 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 CLDND2Q8NHS1 167 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 SPRYD4Q8WW59 207 aaPredicted RBP18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 ASB17Q8WXJ9 295 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 REEP6Q96HR9 211 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 MEGF10Q96KG7 1140 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 OPA3Q9H6K4 179 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 SP140LQ9H930 580 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 CLN6Q9NWW5 311 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 IMPAD1Q9NX62 359 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 C2CD3Q4AC94 2353 aa18.96■□□□□ 0.63
ECHDC1-203ENST00000368291 hCG_38984A0A1B0GV85 526 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 GGT3PA6NGU5 568 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 CLDN25C9JDP6 229 aa18.95■□□□□ 0.62
ECHDC1-203ENST00000368291 GABRB1P18505 474 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms