RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 UBQLN4Q9NRR5 601 aa10.27□□□□□ -0.77
USF1-201ENST00000368019 TMEM100Q9NV29 134 aa10.27□□□□□ -0.77
USF1-201ENST00000368019 HPF1Q9NWY4 346 aa10.27□□□□□ -0.77
USF1-201ENST00000368019 SHPKQ9UHJ6 478 aa10.27□□□□□ -0.77
USF1-201ENST00000368019 MRTO4Q9UKD2 239 aaKnown RBP10.27□□□□□ -0.77
USF1-201ENST00000368019 FARSAQ9Y285 508 aaKnown RBP10.27□□□□□ -0.77
USF1-201ENST00000368019 CPAMD8Q8IZJ3 1885 aa10.27□□□□□ -0.77
USF1-201ENST00000368019 PCSK5Q92824 1860 aa10.27□□□□□ -0.77
USF1-201ENST00000368019 ZNF736B4DX44 427 aaPredicted RBP10.26□□□□□ -0.77
USF1-201ENST00000368019 H7C2Y5 167 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 SULT2B1O00204 365 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CLDN4O14493 209 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CEACAM4O75871 244 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 KDM4BO94953 1096 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 AKR7A3O95154 331 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 IL33O95760 270 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CYB5AP00167 134 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 AMY2AP04746 511 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 GNLYP22749 145 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 MAGEB1P43366 347 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 EFNB2P52799 333 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 HSD17B7P56937 341 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 TAS2R31P59538 309 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CYCSP99999 105 aaKnown RBP10.26□□□□□ -0.77
USF1-201ENST00000368019 GUCA2AQ02747 115 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 DHRS2Q13268 280 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 PRTGQ2VWP7 1150 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 TMEM225Q6GV28 225 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 LCN10Q6JVE6 187 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 C5orf46Q6UWT4 87 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 PRSS41Q7RTY9 318 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 OOSP2Q86WS3 158 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CATSPERDQ86XM0 798 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CARFQ8N187 725 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 BPIFCQ8NFQ6 507 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 OR4N2Q8NGD1 307 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 OR1J4Q8NGS1 313 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 OR6S1Q8NH40 331 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CPT1CQ8TCG5 803 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 STK35Q8TDR2 534 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 ZBTB8AQ96BR9 441 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 HRASLS2Q9NWW9 162 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 VSX1Q9NZR4 365 aaPredicted RBP10.26□□□□□ -0.77
USF1-201ENST00000368019 FBLN5Q9UBX5 448 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 DHDHQ9UQ10 334 aa10.26□□□□□ -0.77
USF1-201ENST00000368019 CREBBPQ92793 2442 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 TMEM218A2RU14 115 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 METTL21EPA6NDL7 271 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 PSMD9O00233 223 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 ZNF264O43296 627 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 SCRG1O75711 98 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 BGLAPP02818 100 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 HEXAP06865 529 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 LYL1P12980 280 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 TPT1P13693 172 aaKnown RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 GRPRP30550 384 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 PGDP52209 483 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 RIDAP52758 137 aaKnown RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 B2MP61769 119 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 DCDP81605 110 aaKnown RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 PLA2G7Q13093 441 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 CHAF1BQ13112 559 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 GRM7Q14831 915 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 TSC22D1Q15714 1073 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 TOMM34Q15785 309 aaPredicted RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 STK11Q15831 433 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 C4orf17Q53FE4 359 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 HIST2H2BCQ6DN03 193 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 AWAT2Q6E213 333 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 C3orf33Q6P1S2 294 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 PAPD4Q6PIY7 484 aaKnown RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 DEGS2Q6QHC5 323 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 ATRAIDQ6UW56 229 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 DRAM2Q6UX65 266 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 IL34Q6ZMJ4 242 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 ZNF704Q6ZNC4 412 aaPredicted RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 DPY19L4Q7Z388 723 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 BIVMQ86UB2 503 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 LYPD6Q86Y78 171 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 SKA3Q8IX90 412 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 BPIFB2Q8N4F0 458 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 ZNF615Q8N8J6 731 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 SLC30A7Q8NEW0 376 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 OR13C8Q8NGS7 320 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 THAP6Q8TBB0 222 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 AQP3Q92482 292 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 ARL11Q969Q4 196 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 VRK1Q99986 396 aaPredicted RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 CHST6Q9GZX3 395 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 OR10A5Q9H207 317 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 ELOVL3Q9HB03 270 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 RAB22AQ9UL26 194 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 B9D1Q9UPM9 204 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 NOP16Q9Y3C1 178 aaKnown RBP10.25□□□□□ -0.77
USF1-201ENST00000368019 OR10H1Q9Y4A9 318 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 CLDN16Q9Y5I7 305 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 DOCK10Q96BY6 2186 aa10.25□□□□□ -0.77
USF1-201ENST00000368019 POLEQ07864 2286 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 LRBAP50851 2863 aa10.24□□□□□ -0.77
USF1-201ENST00000368019 CNTRLQ7Z7A1 2325 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms