RNA–Protein interactions for RNA: ENST00000366896.5

PRKN-204, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-204ENST00000366896 CNTNAP3BQ96NU0 1288 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 SEC11CQ9BY50 192 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 PDE7BQ9NP56 450 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 MYEF2Q9P2K5 600 aaKnown RBP13.12□□□□□ -0.31
PRKN-204ENST00000366896 MBD2Q9UBB5 411 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 MUC6Q6W4X9 2439 aa13.12□□□□□ -0.31
PRKN-204ENST00000366896 LOC390937A0A1W2PQ73 354 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 F8VVB4 439 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 F8VWA3 439 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 SLC16A7O60669 478 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 NUDT14O95848 222 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 F12P00748 615 aaPredicted RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 ISG15P05161 165 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 ZBTB25P24278 435 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 HTR2CP28335 458 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 PRKXP51817 358 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 POLR2GP62487 172 aaKnown RBP eCLIP13.11□□□□□ -0.31
PRKN-204ENST00000366896 CFHR1Q03591 330 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 PLEKHN1Q494U1 663 aaPredicted RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 BPIFB2Q8N4F0 458 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 PAQR8Q8TEZ7 354 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 NAT6Q93015 286 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 PIK3IP1Q96FE7 263 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 DUX1O43812 170 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 SRSF10O75494 262 aaKnown RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 ACAA1P09110 424 aaPredicted RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 GP1BBP13224 206 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 MPZP25189 248 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 CRABP1P29762 137 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 POLR2HP52434 150 aaKnown RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 EBPQ15125 230 aaKnown RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 PRAMEF17Q5VTA0 474 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 LYG2Q86SG7 212 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 SKA3Q8IX90 412 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 OR4A4PQ8NGN8 299 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 TMEM9BQ9NQ34 198 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 VSIG4Q9Y279 399 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 PLEKHA6Q9Y2H5 1048 aa13.11□□□□□ -0.31
PRKN-204ENST00000366896 COL5A1P20908 1838 aaPredicted RBP13.11□□□□□ -0.31
PRKN-204ENST00000366896 A8MVM7 634 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 ZNF736B4DX44 427 aaPredicted RBP13.1□□□□□ -0.31
PRKN-204ENST00000366896 OR6A2O95222 327 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 CYB5AP00167 134 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 GLAP06280 429 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 CD59P13987 128 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 CTLA4P16410 223 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 ABOP16442 354 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 IL12BP29460 328 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 PDZK1IP1Q13113 114 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 C1orf100Q5SVJ3 147 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 TTLL10Q6ZVT0 673 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 ADGRE4PQ86SQ3 457 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 SLC25A42Q86VD7 318 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 SLC30A7Q8NEW0 376 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 SLC6A7Q99884 636 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 NUDT9Q9BW91 350 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 TAS2R4Q9NYW5 299 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 LHX6Q9UPM6 363 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 ASCC3Q8N3C0 2202 aaKnown RBP13.1□□□□□ -0.31
PRKN-204ENST00000366896 LINC00587B1AMM8 73 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 H3BMH7 237 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 DLL1O00548 723 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 IL2RAP01589 272 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 TPT1P13693 172 aaKnown RBP13.1□□□□□ -0.31
PRKN-204ENST00000366896 RAB6AP20340 208 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 DUSP3P51452 185 aaPredicted RBP13.1□□□□□ -0.31
PRKN-204ENST00000366896 PCK2Q16822 640 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 SCGB2B2Q4G0G5 96 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 PHF19Q5T6S3 580 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 DEGS2Q6QHC5 323 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 ZNF627Q7L945 461 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 LYPD6Q86Y78 171 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 C9orf40Q8IXQ3 194 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 OR52N5Q8NH56 324 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 IFI44Q8TCB0 444 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 RHBDD1Q8TEB9 315 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 RNF141Q8WVD5 230 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 FOXRED1Q96CU9 486 aaPredicted RBP13.1□□□□□ -0.31
PRKN-204ENST00000366896 ZDHHC12Q96GR4 267 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 ABHD6Q9BV23 337 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 MMP26Q9NRE1 261 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 UQCC1Q9NVA1 299 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 SLC2A8Q9NY64 477 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 CGGBP1Q9UFW8 167 aaPredicted RBP13.1□□□□□ -0.31
PRKN-204ENST00000366896 EDARQ9UNE0 448 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 R4GMQ9 66 aa13.1□□□□□ -0.31
PRKN-204ENST00000366896 OR2T1O43869 369 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 MPZL1O95297 269 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 LIPCP11150 499 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 ADAM8P78325 824 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 GLO1Q04760 184 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 TSC22D1Q15714 1073 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 ZFP82Q8N141 532 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 PAQR4Q8N4S7 273 aaPredicted RBP13.09□□□□□ -0.31
PRKN-204ENST00000366896 NKAIN3Q8N8D7 197 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 MITD1Q8WV92 249 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 HHLA2Q9UM44 414 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 FARSAQ9Y285 508 aaKnown RBP13.09□□□□□ -0.31
PRKN-204ENST00000366896 UNC13CQ8NB66 2214 aa13.09□□□□□ -0.31
PRKN-204ENST00000366896 NPIPB13A6NJU9 1138 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms