RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 MED13Q9UHV7 2174 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 CD99P14209 185 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 RPL12P30050 165 aaKnown RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 AVPR2P30518 371 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 TSLPQ969D9 159 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 TRIB3Q96RU7 358 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 CDRT15L2A8MXV6 281 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 LBX1P52954 281 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 HBA1P69905 142 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 PJVKQ0ZLH3 352 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 NCR3LG1Q68D85 454 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 SMIM4Q8WVI0 70 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 WSB2Q9NYS7 404 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 BOKQ9UMX3 212 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 ZNF835Q9Y2P0 537 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 TANC2Q9HCD6 1990 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 DRGXA6NNA5 263 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 KIAA1324LA8MWY0 1029 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 ITGB7P26010 798 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 P4HTMQ9NXG6 502 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 RGPD3A6NKT7 1758 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 RGPD4Q7Z3J3 1758 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 SNRPGP15A8MWD9 76 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 PHF1O43189 567 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 LDB3O75112 727 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 FCGR2AP12318 317 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 GAMTQ14353 236 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 HSF5Q4G112 596 aaPredicted RBP10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 ULBP2Q9BZM5 246 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 G3V3Y1 287 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 CCKARP32238 428 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 NKAIN1Q4KMZ8 207 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 ELFN2Q5R3F8 820 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 MBOAT2Q6ZWT7 520 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 C19orf43Q9BQ61 176 aa10.12□□□□□ -0.79
CDC42BPA-205ENST00000366769 SNHG28P0DPA3 235 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 GLB1P16278 677 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 PPIAP62937 165 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SERTAD2Q14140 314 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 TMEM176BQ3YBM2 270 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 CATSPERDQ86XM0 798 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 KLHDC1Q8N7A1 406 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SMOQ99835 787 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 C1orf198Q9H425 327 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 KIAA1456Q9P272 454 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 C4orf47A7E2U8 309 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 UBE2G1P62253 170 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 OR7E24Q6IFN5 339 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ZCCHC14Q8WYQ9 949 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SLC39A7Q92504 469 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SMPD2O60906 423 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 CTNSO60931 367 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SULT1A3P0DMM9 295 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SULT1A4P0DMN0 295 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SLC6A8P48029 635 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 CLDN2P57739 230 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 EXOSC7Q15024 291 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 NKG7Q16617 165 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ACOT6Q3I5F7 207 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ARHGDIGQ99819 225 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 C1QTNF2Q9BXJ5 285 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 V9GYH0 126 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ZNF814B7Z6K7 855 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 GPR18Q14330 331 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 RAB7BQ96AH8 199 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 PRR14Q9BWN1 585 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ARNTLO00327 626 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 RABIFP47224 123 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ERV3-1Q14264 604 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 HFEQ30201 348 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 PLPP6Q8IY26 295 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 M1APQ8TC57 530 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 IFI44Q8TCB0 444 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 S1PR3Q99500 378 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SLC2A10O95528 541 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 AIFM1O95831 613 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 LYG2Q86SG7 212 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 CSNK1G1Q9HCP0 422 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ZNF443Q9Y2A4 671 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 COL1A1P02452 1464 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 MAN2B1O00754 1011 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 GLI4P10075 376 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 PXNP49023 591 aaPredicted RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ARRDC3Q96B67 414 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 TNFRSF12AQ9NP84 129 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 RAB22AQ9UL26 194 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ZDHHC8Q9ULC8 765 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 RNF150Q9ULK6 438 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 NSG1A0A0A6YYJ2 146 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 LOC102723971A0A1B0GUV8 181 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 SERTM1A2A2V5 107 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 NCBP2LA6PVI3 153 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 CD3DP04234 171 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 HTR1FP30939 366 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 GUCA2AQ02747 115 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 LMF2Q9BU23 707 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 ISG20L2Q9H9L3 353 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 DMRT3Q9NQL9 472 aa10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 NXT1Q9UKK6 140 aaKnown RBP10.11□□□□□ -0.79
CDC42BPA-205ENST00000366769 TMEM269A0A1B0GVZ9 245 aa10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms