RNA–Protein interactions for RNA: ENST00000364739.1

RNU4-28P-201, Transcript of RNA, U4 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU4-28P, Length 141 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-28P-201ENST00000364739 OR2J3O76001 311 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 MPV17P39210 176 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 MEF2CQ06413 473 aaPredicted RBP1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 MBOAT2Q6ZWT7 520 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 CAPSLQ8WWF8 208 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 RSPH1Q8WYR4 309 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 FBXO32Q969P5 355 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 RETNQ9HD89 108 aa1.7□□□□□ -2.14
RNU4-28P-201ENST00000364739 ADGRA3Q8IWK6 1321 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 C4orf51C9J302 202 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 PRAMEF26H0Y7S4 382 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 CHMP2AO43633 222 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 CSNK2A2P19784 350 aaPredicted RBP1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 CD70P32970 193 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 TGFBR2P37173 567 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 CRISP1P54107 249 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 PSMD5Q16401 504 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 REEP3Q6NUK4 255 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 IQCKQ8N0W5 287 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 ACMSDQ8TDX5 336 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 NRBF2Q96F24 287 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 ILKAPQ9H0C8 392 aaPredicted RBP1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 BEX1Q9HBH7 125 aa1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 CCDC59Q9P031 241 aaKnown RBP1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 PDP1Q9P0J1 537 aaPredicted RBP1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 RPRD2Q5VT52 1461 aaKnown RBP1.69□□□□□ -2.14
RNU4-28P-201ENST00000364739 LTBP2Q14767 1821 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 A0A1B0GUH1 482 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 EIF3HO15372 352 aaKnown RBP eCLIP1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 DEDDO75618 318 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 MT-ND4P03905 459 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 IGLV7-43P04211 117 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CT45A6P0DMU7 189 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CT45A5P0DMU8 189 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CT45A7P0DMV0 189 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 TCP1P17987 556 aaKnown RBP1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 SLC1A1P43005 524 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 RAB9AP51151 201 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 SELENBP1Q13228 472 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 ART3Q13508 389 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 DDX39BQ13838 428 aaKnown RBP1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CT45A1Q5HYN5 189 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 TMEM69Q5SWH9 247 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 WDR59Q6PJI9 974 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CMC1Q7Z7K0 106 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 MDP1Q86V88 176 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CDR2LQ86X02 465 aaPredicted RBP1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CBLN2Q8IUK8 224 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 TBC1D21Q8IYX1 336 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 NECAB1Q8N987 351 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 OR6Q1Q8NGQ2 317 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CT45A3Q8NHU0 189 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 CENPKQ9BS16 269 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 TAS2R5Q9NYW4 299 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 ZNF492Q9P255 531 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 SAMHD1Q9Y3Z3 626 aaKnown RBP1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 R4GN34 69 aa1.68□□□□□ -2.14
RNU4-28P-201ENST00000364739 FHOD3Q2V2M9 1422 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 PDZK1P1A8MUH7 402 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 INAFM2P0DMQ5 153 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 PRKACBP22694 351 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 OR1E1P30953 314 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 PPP1R7Q15435 360 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 PYDC2Q56P42 97 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 HSP90AB3PQ58FF7 597 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 C9orf135Q5VTT2 229 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 DAZ4Q86SG3 579 aaKnown RBP1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 ERO1BQ86YB8 467 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 GTPBP8Q8N3Z3 284 aaPredicted RBP1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 LINC00469Q8N7U9 141 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 OR2Z1Q8NG97 314 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 C1orf50Q9BV19 199 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 ZNF442Q9H7R0 627 aa1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 DAZ1Q9NQZ3 744 aaKnown RBP1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 BRCA1P38398 1863 aaKnown RBP1.67□□□□□ -2.14
RNU4-28P-201ENST00000364739 COL11A1P12107 1806 aaPredicted RBP1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 C3orf84H3BNL1 204 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 SCAMP2O15127 329 aaKnown RBP1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 TGM6O95932 706 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 RAB7AP51149 207 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 TAS2R43P59537 309 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 TRAM2Q15035 370 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 MAJINQ3KP22 176 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 KRTAP13-4Q3LI77 160 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 GCSAMLQ5JQS6 135 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 SLC16A14Q7RTX9 510 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 RAB3IL1Q8TBN0 382 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 PHOSPHO2Q8TCD6 241 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 HAUS1Q96CS2 278 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 AGPAT4Q9NRZ5 378 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 LRRC42Q9Y546 428 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 ASB3Q9Y575 518 aa1.66□□□□□ -2.14
RNU4-28P-201ENST00000364739 BAHCC1Q9P281 2608 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 CLDN34H7C241 214 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 OR7C2O60412 319 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 AQP8O94778 261 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 ILKQ13418 452 aa1.65□□□□□ -2.15
RNU4-28P-201ENST00000364739 SP6Q3SY56 376 aa1.65□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms