RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 CTAG1AP78358 180 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 CYP24A1Q07973 514 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 SCGB2A2Q13296 93 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 ZNF77Q15935 545 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 LRRC74BQ6ZQY2 392 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 LYPD6Q86Y78 171 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 SLC25A29Q8N8R3 303 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 ANKFN1Q8N957 763 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 UBAC2Q8NBM4 344 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 CHST4Q8NCG5 386 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 RBM14Q96PK6 669 aaKnown RBP-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 TRIB3Q96RU7 358 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 SPXQ9BT56 116 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 TMEM243Q9BU79 118 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 PLEKHF2Q9H8W4 249 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 OR2S2Q9NQN1 319 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 CCL26Q9Y258 94 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 C2orf16Q68DN1 1984 aa-0.52□□□□□ -2.49
RNU6-238P-201ENST00000363313 FHOD3Q2V2M9 1422 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 RNF103-CHMP3A0A140T963 221 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 RDH16O75452 317 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 SERPINB7O75635 380 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 ZNF189O75820 626 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 FARS2O95363 451 aaKnown RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 TROVE2P10155 538 aaKnown RBP eCLIP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 CHI3L1P36222 383 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 RPS23P62266 143 aaKnown RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 SLC25A11Q02978 314 aaKnown RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 NCF4Q15080 339 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 OR7A5Q15622 319 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 CST6Q15828 149 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 TMEM176BQ3YBM2 270 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 OR4F3Q6IEY1 312 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 CD300LGQ6UXG3 332 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 TMEM123Q8N131 208 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 FAM83FQ8NEG4 500 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 ENKURQ8TC29 256 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 SMR3AQ99954 134 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 CWH43Q9H720 699 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 NMRAL1Q9HBL8 299 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 FAM60AQ9NP50 221 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 ETNK2Q9NVF9 386 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 ZNF443Q9Y2A4 671 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 ACOT9Q9Y305 439 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 SOX21Q9Y651 276 aaPredicted RBP-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 SIGLEC1Q9BZZ2 1709 aa-0.53□□□□□ -2.49
RNU6-238P-201ENST00000363313 TRGV2A0A075B6R0 118 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGKV1-9A0A0C4DH69 117 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 SLC19A2O60779 497 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 CA8P35219 290 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 SSR1P43307 286 aaKnown RBP-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 ACTG2P63267 376 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 KLHL40Q2TBA0 621 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 FAM201AQ5SY85 155 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 UBE2UQ5VVX9 321 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 BBS7Q8IWZ6 715 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 CDH26Q8IXH8 852 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 BPIFB6Q8NFQ5 453 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 OR4D6Q8NGJ1 314 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 LRRC29Q8WV35 223 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 PEBP4Q96S96 227 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 FARSAQ9Y285 508 aaKnown RBP-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 U3KQV3 271 aa-0.54□□□□□ -2.5
RNU6-238P-201ENST00000363313 FAM170AA1A519 330 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 CRTAPO75718 401 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 IL10P22301 178 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 GRIA1P42261 906 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 MERTKQ12866 999 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 DHRS2Q13268 280 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 TPD52L1Q16890 204 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 SLC36A3Q495N2 470 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 CNSTQ6PJW8 725 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 C10orf126Q8N4M7 172 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 HDDC3Q8N4P3 179 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 ZFP62Q8NB50 900 aaPredicted RBP-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 MSANTD4Q8NCY6 345 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 OR10D4PQ8NGN7 298 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 SCFD1Q8WVM8 642 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 FAM111AQ96PZ2 611 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 MTMR9Q96QG7 549 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 MS4A8Q9BY19 250 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 STX18Q9P2W9 335 aaKnown RBP-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 MTFP1Q9UDX5 166 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 SLIT2O94813 1529 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 ATG2BQ96BY7 2078 aa-0.55□□□□□ -2.5
RNU6-238P-201ENST00000363313 OTOFQ9HC10 1997 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGKV2-40A0A087WW87 121 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 A0A1W2PQL4 384 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 LRRIQ3A6PVS8 624 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGLL5B9A064 214 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 CDC7O00311 574 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 EEDO75530 441 aaKnown RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 IGKV2D-40P01614 121 aaPredicted RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 FGGP02679 453 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 PRH1P02810 166 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 EIF4EP06730 217 aaKnown RBP-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 HTR1DP28221 377 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 TPMTP51580 245 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 CDH6P55285 790 aa-0.56□□□□□ -2.5
RNU6-238P-201ENST00000363313 GK3PQ14409 553 aa-0.56□□□□□ -2.5
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms