RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 A0A0U1RQK1 487 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 PLRG1O43660 514 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 GUSBP08236 651 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF728P0DKX0 622 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 NQO2P16083 231 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 MRPS34P82930 218 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 MFGE8Q08431 387 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 IKZF1Q13422 519 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF273Q14593 569 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 FAM199XQ6PEV8 388 aaPredicted RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 OR52N4Q8NGI2 321 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 APOBEC4Q8WW27 367 aaKnown RBP12.51□□□□□ -0.41
COL6A1-201ENST00000361866 TCEAL7Q9BRU2 100 aa12.51□□□□□ -0.41
COL6A1-201ENST00000361866 SCN10AQ9Y5Y9 1956 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 RGPD3A6NKT7 1758 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-201ENST00000361866 RGPD4Q7Z3J3 1758 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 TNFRSF10CO14798 259 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 DPP4P27487 766 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 OR1D5P58170 312 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 CLEC9AQ6UXN8 241 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 TMEM182Q6ZP80 229 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-201ENST00000361866 STPG2Q8N412 459 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF709Q8N972 641 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF764Q96H86 408 aaPredicted RBP12.5□□□□□ -0.41
COL6A1-201ENST00000361866 LURAP1Q96LR2 239 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 UMAD1C9J7I0 102 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF749O43361 778 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 MYF5P13349 255 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 H2BFSP57053 126 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 HIST2H3PS2Q5TEC6 136 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 NPSR1Q6W5P4 371 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 SFT2D1Q8WV19 159 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 OR5B12Q96R08 314 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 PBOV1Q9GZY1 135 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 LDAHQ9H6V9 325 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 SLC22A11Q9NSA0 550 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 PTP4A3O75365 173 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 NME1P15531 152 aaKnown RBP12.5□□□□□ -0.41
COL6A1-201ENST00000361866 TAGLN2P37802 199 aaKnown RBP12.5□□□□□ -0.41
COL6A1-201ENST00000361866 TNFRSF4P43489 277 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 MALLQ13021 153 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 ELAVL1Q15717 326 aaKnown RBP12.5□□□□□ -0.41
COL6A1-201ENST00000361866 HAGHQ16775 308 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 DGAT2L6Q6ZPD8 337 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 MOB3CQ70IA8 216 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 PRSS35Q8N3Z0 413 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 OR6K3Q8NGY3 331 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 NMNAT2Q9BZQ4 307 aa12.5□□□□□ -0.41
COL6A1-201ENST00000361866 DDAH2O95865 285 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 PRSS12P56730 875 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 RAB32Q13637 225 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF611Q8N823 705 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 OR5M8Q8NGP6 311 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ISOC2Q96AB3 205 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 SPIN2AQ99865 258 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 SPIN2BQ9BPZ2 258 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 NAA11Q9BSU3 229 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-201ENST00000361866 LMAN1LQ9HAT1 526 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 PIGLQ9Y2B2 252 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 SPTBN2O15020 2390 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 C9orf170A2RU37 121 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 SMCO3A2RU48 225 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 DAOP14920 347 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 GLRA1P23415 457 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ZP1P60852 638 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF117Q03924 483 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 TMEM128Q5BJH2 165 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 MESTQ5EB52 335 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ARTNQ5T4W7 220 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 PLCXD3Q63HM9 321 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 CMTM1Q8IZ96 169 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 STT3BQ8TCJ2 826 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 FRZBQ92765 325 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF707Q96C28 371 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-201ENST00000361866 NPAS1Q99742 590 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 GPR173Q9NS66 373 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 PLXNA1Q9UIW2 1896 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 TMEM218A2RU14 115 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 RNASEK-C17orf49H0YIS7 233 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 TBX6O95947 436 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-201ENST00000361866 SLC25A1P53007 311 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ZNF660Q6AZW8 331 aaPredicted RBP12.49□□□□□ -0.41
COL6A1-201ENST00000361866 C8orf44Q96CB5 159 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 PLA2G2FQ9BZM2 168 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 LAT2Q9GZY6 243 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 METTL9Q9H1A3 318 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 S1PR5Q9H228 398 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 NELFAQ9H3P2 528 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 ANKRD10Q9NXR5 420 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 BRCA1P38398 1863 aaKnown RBP12.49□□□□□ -0.41
COL6A1-201ENST00000361866 RLFQ13129 1914 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 DOCK4Q8N1I0 1966 aa12.49□□□□□ -0.41
COL6A1-201ENST00000361866 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ANGPTL7O43827 346 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 F10P00742 488 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 QDPRP09417 244 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ACAA2P42765 397 aaKnown RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 FASLGP48023 281 aa12.48□□□□□ -0.41
COL6A1-201ENST00000361866 ARF1P84077 181 aaKnown RBP12.48□□□□□ -0.41
COL6A1-201ENST00000361866 RIN1Q13671 783 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms