RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 TET2Q6N021 2002 aaPredicted RBP11.4□□□□□ -0.59
VPS29-201ENST00000360579 DVL1O14640 695 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 XPNPEP2O43895 674 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 PAHP00439 452 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 CRABP1P29762 137 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 SELENOWP63302 87 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 MZT1Q08AG7 82 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 LRRC23Q53EV4 343 aaPredicted RBP11.39□□□□□ -0.59
VPS29-201ENST00000360579 OTPQ5XKR4 325 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 ZNF730Q6ZMV8 503 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 MBOAT2Q6ZWT7 520 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 ST8SIA4Q92187 359 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 SLCO4A1Q96BD0 722 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 ADAT1Q9BUB4 502 aaKnown RBP11.39□□□□□ -0.59
VPS29-201ENST00000360579 NUAK2Q9H093 628 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 RASSF4Q9H2L5 321 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 RPS6KA6Q9UK32 745 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 LHFPL6Q9Y693 200 aa11.39□□□□□ -0.59
VPS29-201ENST00000360579 F5H5K5 113 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 CDC42EP2O14613 210 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 NDUFB2O95178 105 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 GYPAP02724 150 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 LCATP04180 440 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 IFNW1P05000 195 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 ACSM4P0C7M7 580 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 CA6P23280 308 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 KDELR2P33947 212 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 GPR4P46093 362 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 KRTAP27-1Q3LI81 207 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 RABL3Q5HYI8 236 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 RRM2BQ7LG56 351 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 MRPL21Q7Z2W9 205 aaKnown RBP11.38□□□□□ -0.59
VPS29-201ENST00000360579 DTX3Q8N9I9 347 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 NRIP3Q9NQ35 241 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 NECAP2Q9NVZ3 263 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 C1orf123Q9NWV4 160 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 ONECUT1Q9UBC0 465 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 RHCGQ9UBD6 479 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 TMEM5Q9Y2B1 443 aa11.38□□□□□ -0.59
VPS29-201ENST00000360579 A0A087WUU8 490 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 CD300LBA8K4G0 201 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 NPFFO15130 113 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 NPPAP01160 153 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 CENPAP49450 140 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 HOXA4Q00056 320 aaPredicted RBP11.37□□□□□ -0.59
VPS29-201ENST00000360579 RSPO1Q2MKA7 263 aaPredicted RBP11.37□□□□□ -0.59
VPS29-201ENST00000360579 VAX1Q5SQQ9 334 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 TEX36Q5VZQ5 186 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 CORO6Q6QEF8 472 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 FAM90A1Q86YD7 464 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 LY6G5BQ8NDX9 201 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 CFHR4Q92496 578 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 GPX7Q96SL4 187 aaPredicted RBP11.37□□□□□ -0.59
VPS29-201ENST00000360579 PITX2Q99697 317 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 ATF6BQ99941 703 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 SEMA6AQ9H2E6 1030 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 PPA2Q9H2U2 334 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 TMBIM4Q9HC24 238 aa11.37□□□□□ -0.59
VPS29-201ENST00000360579 MRPL15Q9P015 296 aaKnown RBP11.37□□□□□ -0.59
VPS29-201ENST00000360579 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.36□□□□□ -0.59
VPS29-201ENST00000360579 hCG_1807616A0A1W2PRN6 198 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 A6NLC8 198 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 SOCS2O14508 198 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 PPP1R3DO95685 299 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 ZNF26P17031 533 aaPredicted RBP11.36□□□□□ -0.59
VPS29-201ENST00000360579 GGT2P36268 569 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 MDH1P40925 334 aaKnown RBP11.36□□□□□ -0.59
VPS29-201ENST00000360579 KIR2DS4P43632 304 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 YAP1P46937 504 aaKnown RBP11.36□□□□□ -0.59
VPS29-201ENST00000360579 RPS6KA3P51812 740 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 EFNB2P52799 333 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 TPTEP56180 551 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 TRAP1Q12931 704 aaKnown RBP11.36□□□□□ -0.59
VPS29-201ENST00000360579 MEP1BQ16820 701 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 MICBQ29980 383 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 SLC36A3Q495N2 470 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 COQ5Q5HYK3 327 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 SLC36A1Q7Z2H8 476 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.36□□□□□ -0.59
VPS29-201ENST00000360579 GCSAMQ8N6F7 178 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 OR4S1Q8NGB4 309 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 OR4C13Q8NGP0 309 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 OR2AJ1Q8NGZ0 328 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 SGCDQ92629 289 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 FAM234AQ9H0X4 552 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 ANKRD19PQ9H560 264 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 C14orf119Q9NWQ9 140 aa11.36□□□□□ -0.59
VPS29-201ENST00000360579 GGT3PA6NGU5 568 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 FAM220BPB1ANY3 271 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 FFAR1O14842 300 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 PTP4A3O75365 173 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 TXNDC12O95881 172 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 LHBP01229 141 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
VPS29-201ENST00000360579 GRK5P34947 590 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 ACSM1Q08AH1 577 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 METTL21CQ5VZV1 264 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 SLC18B1Q6NT16 456 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 TBPL2Q6SJ96 375 aa11.35□□□□□ -0.59
VPS29-201ENST00000360579 DPY19L2P2Q6ZN68 376 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms