RNA–Protein interactions for RNA: ENST00000359544.2

UBAP1-202, Transcript of ubiquitin associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBAP1, Length 2,535 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBAP1-202ENST00000359544 JTBO76095 146 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SFT2D2O95562 160 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 CD63P08962 238 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SP9P0CG40 484 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 HKR1P10072 659 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 TAS2R60P59551 318 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 CD81P60033 236 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 ZNHIT3Q15649 155 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 EEF1A1P5Q5VTE0 462 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 LRRC69Q6ZNQ3 347 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 REC114Q7Z4M0 266 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 KDM8Q8N371 416 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SPEM1Q8N4L4 309 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SLC25A44Q96H78 314 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 C2orf50Q96LR7 162 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 CAPN10Q9HC96 672 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 GDF2Q9UK05 429 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SLC22A13Q9Y226 551 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 MEMO1Q9Y316 297 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 TMEM184BQ9Y519 407 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 FLVCR1Q9Y5Y0 555 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 EDDM13A0A1B0GTR0 161 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 FGF17O60258 216 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SCGNO76038 276 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 GAPDHP04406 335 aaKnown RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SMIM10L1P0DMW3 83 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 DAOP14920 347 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SNCAP37840 140 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 RPS27P42677 84 aaKnown RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 DNASE1L1P49184 302 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF141Q15928 474 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 LPAL2Q16609 132 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 MEP1BQ16820 701 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 C1orf100Q5SVJ3 147 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 TAF8Q7Z7C8 310 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF679Q8IYX0 411 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 GVQW1Q8N7I0 195 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 NKAIN3Q8N8D7 197 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 LIPHQ8WWY8 451 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 ROBO4Q8WZ75 1007 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 HOXB13Q92826 284 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 C3orf49Q96BT1 292 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF775Q96BV0 537 aaPredicted RBP13.33□□□□□ -0.28
UBAP1-202ENST00000359544 SMIM10Q96HG1 83 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 TPSD1Q9BZJ3 242 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 LYRM4Q9HD34 91 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 OR1A2Q9Y585 309 aa13.33□□□□□ -0.28
UBAP1-202ENST00000359544 GPR179Q6PRD1 2367 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 DCDC2BA2VCK2 349 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 K7ESF4 209 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 YIF1AO95070 293 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 GPR75O95800 540 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 ELAVL3Q14576 367 aaKnown RBP13.32□□□□□ -0.28
UBAP1-202ENST00000359544 ZNF74Q16587 644 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 GUK1Q16774 197 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 ARRDC1Q8N5I2 433 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 PNLDC1Q8NA58 520 aaKnown RBP13.32□□□□□ -0.28
UBAP1-202ENST00000359544 CHST4Q8NCG5 386 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 OR9K2Q8NGE7 335 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 NKD1Q969G9 470 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 S100PBPQ96BU1 408 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 TIMM29Q9BSF4 260 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 NRSN2Q9GZP1 204 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 LOC390937A0A1W2PQ73 354 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 UMAD1C9J7I0 102 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 H7C1C5 153 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 ARG1P05089 322 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 CT62P0C5K7 136 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 HIST1H1BP16401 226 aaKnown RBP13.32□□□□□ -0.28
UBAP1-202ENST00000359544 LCN6P62502 163 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 FAM3AP98173 230 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 MGAT2Q10469 447 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 RAB32Q13637 225 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 FAM53BQ14153 422 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 SCGB3A2Q96PL1 93 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 AMELYQ99218 206 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 C20orf24Q9BUV8 137 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 SLC26A1Q9H2B4 701 aa13.32□□□□□ -0.28
UBAP1-202ENST00000359544 METTL8Q9H825 291 aaKnown RBP13.32□□□□□ -0.28
UBAP1-202ENST00000359544 FAM212BQ9NTI7 297 aaPredicted RBP13.32□□□□□ -0.28
UBAP1-202ENST00000359544 SCN3AQ9NY46 2000 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 RAB27BO00194 218 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 ADAP1O75689 374 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 ID4P47928 161 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 SKP2Q13309 424 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 SSX2Q16385 188 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 MESTQ5EB52 335 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 OPN5Q6U736 354 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 HEPN1Q6WQI6 88 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 OR52R1Q8NGF1 315 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 TERB2Q8NHR7 220 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 RAB33BQ9H082 229 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 PRDM13Q9H4Q3 707 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 CUTCQ9NTM9 273 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 IGKV1D-42A0A075B6H8 117 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 A0A1W2PPE2 198 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 CSTAP01040 98 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 F13BP05160 661 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 S100A10P60903 97 aa13.31□□□□□ -0.28
UBAP1-202ENST00000359544 NHLH1Q02575 133 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms