RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 RPS19BP1Q86WX3 136 aaKnown RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 ZNF784Q8NCA9 323 aaPredicted RBP8.89□□□□□ -0.99
CHD3-202ENST00000358181 B3GNT7Q8NFL0 401 aa8.89□□□□□ -0.99
CHD3-202ENST00000358181 C10orf71Q711Q0 1435 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SERINC4A6NH21 518 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 PPP5D1E7EU14 171 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 PPP1R17O96001 155 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 BMP2P12643 396 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 ROM1Q03395 351 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 GLYATL3Q5SZD4 288 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 LYG1Q8N1E2 194 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SVBPQ8N300 66 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 OR2T11Q8NH01 316 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 OR51E1Q8TCB6 317 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 ZNF2Q9BSG1 426 aaPredicted RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 AMDHD2Q9Y303 409 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 UGT2A1Q9Y4X1 527 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 A0A1B0GX78 115 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 A0A1W2PRX2 142 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 TRABD2BA6NFA1 517 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SPRY1O43609 319 aaPredicted RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 MT-ND4LP03901 98 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 NAT2P11245 290 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 HTR1DP28221 377 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 GCSAMLQ5JQS6 135 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 NRARPQ7Z6K4 114 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 TMEM231Q9H6L2 316 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 PARP11Q9NR21 331 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 LRP6O75581 1613 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 ZC3H12DA2A288 527 aaKnown RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 EIF3FO00303 357 aaPredicted RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 IL5P05113 134 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 OR3A1P47881 315 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 PPOXP50336 477 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SYPL1Q16563 259 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 MFSD4AQ8N468 514 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SLC22A24Q8N4F4 322 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 KCNRGQ8N5I3 272 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 TRIB3Q96RU7 358 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 P2RX4Q99571 388 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 NRIP3Q9NQ35 241 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 C1GALT1Q9NS00 363 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 STRAPQ9Y3F4 350 aaKnown RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 FER1L6Q2WGJ9 1857 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 LTBP3Q9NS15 1303 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 TTRP02766 147 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 DUSP1P28562 367 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 TOR2AQ5JU69 321 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 DGAT2L6Q6ZPD8 337 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 MDGA2Q7Z553 956 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 LRP11Q86VZ4 500 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 LACC1Q8IV20 430 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 METTL17Q9H7H0 456 aaPredicted RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 VSIG4Q9Y279 399 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 TNFRSF10CO14798 259 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SIAH2O43255 324 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 B3GALT4O96024 378 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 HCCSP53701 268 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 MFAP4P55083 255 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SRPXP78539 464 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 OR2F1Q13607 317 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 HES3Q5TGS1 186 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SLC26A10Q8NG04 563 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 OR52L2PQ8NGH6 319 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 OR10Z1Q8NGY1 313 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 ZNF586Q9NXT0 402 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 SNX11Q9Y5W9 270 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 CACNA1SQ13698 1873 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 M0R1X1 148 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 ARNTP27540 789 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 LOXL3P58215 753 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 ZNF239Q16600 458 aaKnown RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 ZDHHC23Q8IYP9 409 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 MRPL13Q9BYD1 178 aaKnown RBP8.88□□□□□ -0.99
CHD3-202ENST00000358181 PIGMQ9H3S5 423 aa8.88□□□□□ -0.99
CHD3-202ENST00000358181 NUP98P52948 1817 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 LOC389332A0A1B0GUA5 103 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 SEMA7AO75326 666 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 SIX6O95475 246 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 HPP00738 406 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 HOXC4P09017 264 aaPredicted RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 KCNJ10P78508 379 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 LDLRAD1Q5T700 205 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 LAIR1Q6GTX8 287 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 GRINAQ7Z429 371 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 CARFQ8N187 725 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 EIF4E3Q8N5X7 224 aaKnown RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 C5orf17Q8NAS9 161 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 OR8B3Q8NGG8 313 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 KCNG3Q8TAE7 436 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 LGALS14Q8TCE9 139 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 OR8B2Q96RD0 313 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 SPAG8Q99932 426 aaPredicted RBP8.87□□□□□ -0.99
CHD3-202ENST00000358181 PCED1AQ9H1Q7 454 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 MUTYHQ9UIF7 546 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 NTNG1Q9Y2I2 539 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 CDHR4A6H8M9 788 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 TMEM212A6NML5 194 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 PPP6CO00743 305 aa8.87□□□□□ -0.99
CHD3-202ENST00000358181 DFFBO76075 338 aa8.87□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms