RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 NOXO1Q8NFA2 376 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 OR5B2Q96R09 309 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 SLC25A21Q9BQT8 299 aaPredicted RBP12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 GSX2Q9BZM3 304 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 ZNF700Q9H0M5 742 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 C1orf198Q9H425 327 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 CENPMQ9NSP4 180 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 KIF25Q9UIL4 384 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 CHCHD2Q9Y6H1 151 aaPredicted RBP12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 ALPK2Q86TB3 2170 aa12.67□□□□□ -0.38
NIPAL3-203ENST00000358028 TMEM269A0A1B0GVZ9 245 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 EIF1AYO14602 144 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 KDM4BO94953 1096 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 CRYZL1O95825 349 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 CELA2AP08217 269 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 TCN2P20062 427 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 LAP3P28838 519 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 TMPRSS3P57727 454 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 CLRN1P58418 232 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 GLYATL3Q5SZD4 288 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 THEM4Q5T1C6 240 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 GABRG1Q8N1C3 465 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 SLC25A43Q8WUT9 341 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 SLAMF6Q96DU3 332 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 SEH1LQ96EE3 360 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 BBC3Q96PG8 261 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 PTGES2Q9H7Z7 377 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 PTRH2Q9Y3E5 179 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 BOD1L1Q8NFC6 3051 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 CFAP46Q8IYW2 2715 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 A0A1W2PPL8 197 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 C9J4A7 227 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 MCRIP1C9JLW8 97 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 P2RY10O00398 339 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 TRAF3IP2O43734 574 aaPredicted RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 IGHG1P01857 330 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 RLN1P04808 185 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 ITGB2P05107 769 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 PGA4P0DJD7 388 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 PGA3P0DJD8 388 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 COX6A1P12074 109 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 ADH6P28332 368 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 EIF1P41567 113 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 MMP16P51512 607 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 ARPC4P59998 168 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 RPS18P62269 152 aaKnown RBP12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 CXADRP78310 365 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 GUCA2AQ02747 115 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 EXT1Q16394 746 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 TOR2AQ5JU69 321 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 PRAMEF20Q5VT98 475 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 RAB12Q6IQ22 244 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 OR2AK2Q8NG84 335 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 OR51S1Q8NGJ8 323 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 ELMOD3Q96FG2 381 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 IMMP1LQ96LU5 166 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 FAM206AQ9NX38 181 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 OPN4Q9UHM6 478 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 CYB5R1Q9UHQ9 305 aa12.66□□□□□ -0.38
NIPAL3-203ENST00000358028 BAHCC1Q9P281 2608 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 F5H5P2 479 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 LMX1BO60663 402 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 PMS2P2O95744 297 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 PDGFAP04085 211 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 CD3DP04234 171 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 RRASP10301 218 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 CXCL2P19875 107 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 M6PRP20645 277 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 EIF1AXP47813 144 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 SEC61A1P61619 476 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 POU4F3Q15319 338 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 ZNF239Q16600 458 aaKnown RBP12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 B3GNTL1Q67FW5 361 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 TMEM81Q6P7N7 255 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 KLHL24Q6TFL4 600 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 OPN5Q6U736 354 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 C3P1Q6ZMU1 363 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 COMMD7Q86VX2 200 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 OR51A2Q8NGJ7 313 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 ZBTB8AQ96BR9 441 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 OXGR1Q96P68 337 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 NKX3-1Q99801 234 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 EXO5Q9H790 373 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 CGGBP1Q9UFW8 167 aaPredicted RBP12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 HDGFL3Q9Y3E1 203 aa12.65□□□□□ -0.38
NIPAL3-203ENST00000358028 A0A087WZY1 265 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 ZNF814B7Z6K7 855 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 H3BUI4 141 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 K7ENP7 123 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 SCGNO76038 276 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 RAB3DO95716 219 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 CD74P04233 296 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 FKBP2P26885 142 aaKnown RBP12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 SFTPDP35247 375 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 UCNP55089 124 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 GMFBP60983 142 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 SPOCK1Q08629 439 aa12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 TMEM176BQ3YBM2 270 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 INO80CQ6PI98 192 aaPredicted RBP12.64□□□□□ -0.39
NIPAL3-203ENST00000358028 SLC25A47Q6Q0C1 308 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms