RNA–Protein interactions for RNA: ENST00000357348.9

RTFDC1-202, Transcript of Protein RTF2 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTFDC1, Length 2,212 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-202ENST00000357348 RTP5Q14D33 572 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 INPP5JQ15735 1006 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 RAB11BQ15907 218 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF74Q16587 644 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 MICBQ29980 383 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 PAN3Q58A45 887 aaKnown RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 DCAF10Q5QP82 559 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ATPAF1Q5TC12 328 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF468Q5VIY5 522 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 PRAMEF20Q5VT98 475 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ARMC10Q8N2F6 343 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 ZNF676Q8N7Q3 588 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 OR51A4Q8NGJ6 313 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 SLC22A8Q8TCC7 542 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 TSSK2Q96PF2 358 aa11.28□□□□□ -0.6
RTFDC1-202ENST00000357348 TMEM218A2RU14 115 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ARGFXA6NJG6 315 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 G3V3Y1 287 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 DCTN6O00399 190 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 PHYHO14832 338 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 SIGLEC5O15389 551 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 HCRTR2O43614 444 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 RAB3DO95716 219 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 NUDT14O95848 222 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 MPZP25189 248 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 LUMP51884 338 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ASPHD2Q6ICH7 369 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ACOT7LQ6ZUV0 252 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 TMEM156Q8N614 296 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 DVL3Q92997 716 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 KLRF1Q9NZS2 232 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 TMEM14AQ9Y6G1 99 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 MED12Q93074 2177 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 PRRC2CQ9Y520 2896 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 DXOO77932 396 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 AKR7A3O95154 331 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ASAH2BP0C7U1 165 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 CBX5P45973 191 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF117Q03924 483 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 SNTB1Q13884 538 aaKnown RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 WDR38Q5JTN6 314 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 EEF1A1P5Q5VTE0 462 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF813Q6ZN06 617 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 NUP54Q7Z3B4 507 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ATG4DQ86TL0 474 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF440Q8IYI8 595 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 TMEM185AQ8NFB2 350 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF524Q96C55 264 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 VRK1Q99986 396 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 SAV1Q9H4B6 383 aaPredicted RBP11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 TMEM185BQ9H7F4 350 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 SLC2A8Q9NY64 477 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 LAMP5Q9UJQ1 280 aa11.27□□□□□ -0.61
RTFDC1-202ENST00000357348 FREM3P0C091 2139 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 A0A0A6YYH2 397 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 MEIS3P1A6NDR6 274 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 A6NJ64 397 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 H7C2Y5 167 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 LDLRAD4O15165 306 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF264O43296 627 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 IL2RAP01589 272 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 CTXN1P60606 82 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 DHRS2Q13268 280 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 CLN3Q13286 438 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 ELP2Q6IA86 826 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 DHRS7BQ6IAN0 325 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 POMZP3Q6PJE2 187 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 PUSL1Q8N0Z8 303 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 GALNT16Q8N428 558 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 OR13C8Q8NGS7 320 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 SPACA9Q96E40 222 aaPredicted RBP11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 DNAJA3Q96EY1 480 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 ZNF75AQ96N20 296 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 METTL7AQ9H8H3 244 aa11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 CARHSP1Q9Y2V2 147 aaKnown RBP11.26□□□□□ -0.61
RTFDC1-202ENST00000357348 PQLC2LA1A4F0 135 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 SULT2B1O00204 365 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 FADS1O60427 444 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 SERPINA7P05543 415 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 PNMTP11086 282 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 ZBTB25P24278 435 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 SSR4P51571 173 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 S100A12P80511 92 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 TOMM34Q15785 309 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 ALG10Q5BKT4 473 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 MESTQ5EB52 335 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 FNDC7Q5VTL7 733 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 IGF2-ASQ6U949 168 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 LINC00696Q6ZRV3 163 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 MDGA2Q7Z553 956 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 SVBPQ8N300 66 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 OR1J2Q8NGS2 313 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 OR8S1Q8NH09 359 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 STOML3Q8TAV4 291 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 PSMF1Q92530 271 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 TINAGL1Q9GZM7 467 aaPredicted RBP11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 IFT22Q9H7X7 185 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 COA4Q9NYJ1 87 aa11.25□□□□□ -0.61
RTFDC1-202ENST00000357348 IKZF2Q9UKS7 526 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms