RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 A0A0B4J2A0 478 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 IFITM10A6NMD0 228 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 RNASEK-C17orf49H0YIS7 233 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 SULT2B1O00204 365 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC17A2O00624 439 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 BCAT2O15382 392 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 PLRG1O43660 514 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 MPZL1O95297 269 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 F10P00742 488 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 MFGE8Q08431 387 aaPredicted RBP7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 AARDQ4LEZ3 155 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 RNASE10Q5GAN6 216 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 DMRTC1Q5HYR2 192 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 WBP2NLQ6ICG8 309 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 C11orf87Q6NUJ2 197 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 CHRDL2Q6WN34 429 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 TAF8Q7Z7C8 310 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 FOXRED2Q8IWF2 684 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 TAAR8Q969N4 342 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF524Q96C55 264 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 TCTN2Q96GX1 697 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 SMOC1Q9H4F8 434 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 TUBA4BQ9H853 241 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 SHPKQ9UHJ6 478 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 MRPS33Q9Y291 106 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 EMC9Q9Y3B6 208 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 MRPS18BQ9Y676 258 aaKnown RBP7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM14AQ9Y6G1 99 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 RTTNQ86VV8 2226 aa7.39□□□□□ -1.23
CDC42SE1-201ENST00000357235 CXCR1P25024 350 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 RGS19P49795 217 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 RPS4XP62701 263 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 HGFACQ04756 655 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 EGR4Q05215 589 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 AIMP2Q13155 320 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PPP1R1AQ13522 171 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 NFATC4Q14934 902 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM196Q5HYL7 178 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM225Q6GV28 225 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF321PQ8N8H1 164 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR13C3Q8NGS6 347 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 NUDCD2Q8WVJ2 157 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PTGES2Q9H7Z7 377 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZDHHC8Q9ULC8 765 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 HIF3AQ9Y2N7 669 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMED7Q9Y3B3 224 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 A0A0J9YY10 115 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 C7orf77A4D0Y5 90 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 LINC01553A4QN01 128 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ADAM10O14672 748 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 AGPAT2O15120 278 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TOX3O15405 576 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 LMX1BO60663 402 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 CYTIPO60759 359 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF432O94892 652 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 IFNA6P05013 189 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ITGB2P05107 769 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SNRPCP09234 159 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PGAM2P15259 253 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 CEACAM6P40199 344 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 CASRP41180 1078 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 CAV2P51636 162 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PMPCAQ10713 525 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TOMM34Q15785 309 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF141Q15928 474 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 DNLZQ5SXM8 178 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 LINC00346Q8IVM7 164 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ZNF595Q8IYB9 648 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR56B1Q8NGI3 324 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 OR5M8Q8NGP6 311 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 OTOSQ8NHW6 89 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 GPX8Q8TED1 209 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC37A2Q8TED4 501 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMED6Q8WW62 240 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 DCUN1D4Q92564 292 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 MALSU1Q96EH3 234 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 BMFQ96LC9 184 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 CST11Q9H112 138 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PRR13Q9NZ81 148 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TRBV5-7A0A0A0MS05 114 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PRR19A6NJB7 356 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 C17orf105B2RV13 164 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 B4DGG1 531 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 M0R036 132 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TNFSF14O43557 240 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PNMTP11086 282 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TPT1P13693 172 aaKnown RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 PI3P19957 117 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 RAC1P63000 192 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ACTBL2Q562R1 376 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SAPCD1Q5SSQ6 148 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 TMEM184AQ6ZMB5 413 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 ANGPTL5Q86XS5 388 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 FAM160A2Q8N612 972 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 BADQ92934 168 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 MCHR2Q969V1 340 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC41A2Q96JW4 573 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SPACA5Q96QH8 159 aa7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SLC25A21Q9BQT8 299 aaPredicted RBP7.38□□□□□ -1.23
CDC42SE1-201ENST00000357235 SULT4A1Q9BR01 284 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms