RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 HHEXQ03014 270 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 WDR34Q96EX3 536 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RTL8AQ9BWD3 113 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 GLIPR2Q9H4G4 154 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TREM2Q9NZC2 230 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 HDGFL3Q9Y3E1 203 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF724A8MTY0 619 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 XRCC2O43543 280 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RBP2P50120 134 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 HSF1Q00613 529 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SMAGPQ0VAQ4 97 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 H2BFWTQ7Z2G1 175 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 LINC00615Q96LM1 132 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 MS4A10Q96PG2 267 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 S1PR3Q99500 378 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ARHGDIGQ99819 225 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 OCEL1Q9H607 264 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 UQCC1Q9NVA1 299 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TRAV20A0A0B4J274 112 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ARIH2OSQ8N7S6 290 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SLC35G3Q8N808 338 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ARSGQ96EG1 525 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TOX2Q96NM4 488 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PTDSS2Q9BVG9 487 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RNF39Q9H2S5 420 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 GKN1Q9NS71 199 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SLC23A2Q9UGH3 650 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 FASLGP48023 281 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ARL16Q0P5N6 197 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 IGFBP7Q16270 282 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 LINC00346Q8IVM7 164 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TGIF2Q9GZN2 237 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ZDHHC8Q9ULC8 765 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 HLA-DQB1P01920 261 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PLCXD3Q63HM9 321 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 GLIPR1L1Q6UWM5 242 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 OR2G2Q8NGZ5 317 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 KTI12Q96EK9 354 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TMEM191AQ9H0A3 160 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SCN7AQ01118 1682 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PRAMEF27A3QJZ7 478 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 NTSR1P30989 418 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 NHLH2Q02577 135 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 DHRS2Q13268 280 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PRAMEF9Q5VWM5 478 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TAS1R1Q7RTX1 841 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TMEM104Q8NE00 496 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RTN4IP1Q8WWV3 396 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 UTP23Q9BRU9 249 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 CHST11Q9NPF2 352 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 HSPB8Q9UJY1 196 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 CA14Q9ULX7 337 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SEC11BP0C7V7 166 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 OR8G3PP0DMU2 310 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RRADP55042 308 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 CRMP1Q14194 572 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 KMT5CQ86Y97 462 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PMEPA1Q969W9 287 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PRRX2Q99811 253 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 IGF2RP11717 2491 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ZNF236Q9UL36 1845 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TRAV27A0A087WT01 109 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 A0A087X0M5 115 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 A0A1B0GX30 115 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 HMGN4O00479 90 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 MBTPS2O43462 519 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SNAI1O95863 264 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 VASPP50552 380 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 FAM182BQ5T319 152 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SCD5Q86SK9 330 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SLC35E1Q96K37 410 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 LRFN3Q9BTN0 628 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 C20orf27Q9GZN8 174 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 MPPED1O15442 326 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RPL29P47914 159 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 EEF1A1P68104 462 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 FABP5Q01469 135 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 OC90Q02509 493 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ARHGAP11BQ3KRB8 267 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RIPPLY2Q5TAB7 128 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 EEF1A1P5Q5VTE0 462 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 C2orf73Q8N5S3 287 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 CYB5D2Q8WUJ1 264 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 HMGB4Q8WW32 186 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 TOE1Q96GM8 510 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PACRGQ96M98 296 aaPredicted RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SEMA6CQ9H3T2 930 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 MRPL15Q9P015 296 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 APOBEC3BQ9UH17 382 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 GABRR1P24046 479 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 NUFIP2Q7Z417 695 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 SLC39A11Q8N1S5 342 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 OR13C9Q8NGT0 318 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 RRP8O43159 456 aaKnown RBP5.98□□□□□ -1.45
VPS13B-202ENST00000357162 APOA2P02652 100 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 PMP2P02689 132 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 VDAC1P21796 283 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ARR3P36575 388 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 NFATC4Q14934 902 aa5.98□□□□□ -1.45
VPS13B-202ENST00000357162 ABHD17BQ5VST6 288 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms