RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 SLC35A2P78381 396 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 LIPNQ5VXI9 398 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 C11orf71Q6IPW1 123 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 FDX2Q6P4F2 183 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 AHSA2Q719I0 299 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 SSX6Q7RTT6 188 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 FTMTQ8N4E7 242 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 MBD6Q96DN6 1003 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 PGAM5Q96HS1 289 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 MRPL37Q9BZE1 423 aaKnown RBP13.73□□□□□ -0.21
FDPS-201ENST00000356657 OR51B6Q9H340 312 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 MS4A5Q9H3V2 200 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 FAM206AQ9NX38 181 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 GNG8Q9UK08 70 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 LAMP3Q9UQV4 416 aa13.73□□□□□ -0.21
FDPS-201ENST00000356657 ARID1AO14497 2285 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 TMEM129A0AVI4 362 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 PRR32B1ATL7 298 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 LOC110117498-PIK3R3F6TDL0 507 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 H7C417 338 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 M0R233 179 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 MRPS14O60783 128 aaKnown RBP13.72□□□□□ -0.21
FDPS-201ENST00000356657 ERCC1P07992 297 aaPredicted RBP13.72□□□□□ -0.21
FDPS-201ENST00000356657 SOD3P08294 240 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 LIMS3P0CW19 117 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 LIMS4P0CW20 117 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 ATP6V1B1P15313 513 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 PAX1P15863 534 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 CRHBPP24387 322 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 DNASE1P24855 282 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 TIGD6Q17RP2 521 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 PGAP1Q75T13 922 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 MRPL21Q7Z2W9 205 aaKnown RBP13.72□□□□□ -0.21
FDPS-201ENST00000356657 KLHL36Q8N4N3 616 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 CCDC54Q8NEL0 328 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 OR52N1Q8NH53 320 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 HAVCR1Q96D42 359 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 REPIN1Q9BWE0 567 aaKnown RBP13.72□□□□□ -0.21
FDPS-201ENST00000356657 DUSP21Q9H596 190 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 BEX4Q9NWD9 120 aaPredicted RBP13.72□□□□□ -0.21
FDPS-201ENST00000356657 DUSP13Q9UII6 198 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 NOP16Q9Y3C1 178 aaKnown RBP13.72□□□□□ -0.21
FDPS-201ENST00000356657 PCDHGB5Q9Y5G0 923 aa13.72□□□□□ -0.21
FDPS-201ENST00000356657 A0A1W2PPW3 197 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 PLSCR5A0PG75 271 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 OVOL3O00110 214 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 PSMD9O00233 223 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 SRSF10O75494 262 aaKnown RBP13.71□□□□□ -0.21
FDPS-201ENST00000356657 CD53P19397 219 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 CCR9P51686 369 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 GABARAPL2P60520 117 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 ERVS71-1P61550 626 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 GK2Q14410 553 aaPredicted RBP13.71□□□□□ -0.21
FDPS-201ENST00000356657 SNAI3Q3KNW1 292 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 CCDC58Q4VC31 144 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 FAM209AQ5JX71 171 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 SPATA46Q5T0L3 261 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 BCL2L15Q5TBC7 163 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 FAM57BQ71RH2 274 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 LHFPL3Q86UP9 236 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 ZNF786Q8N393 782 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 C4orf36Q96KX1 117 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 DIRC2Q96SL1 478 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 ZNF649Q9BS31 505 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 CDCA4Q9BXL8 241 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 TTTY10Q9BZA0 68 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 SLC22A4Q9H015 551 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 ERGIC3Q9Y282 383 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 LRRC42Q9Y546 428 aa13.71□□□□□ -0.21
FDPS-201ENST00000356657 TEX15Q9BXT5 2789 aa13.71□□□□□ -0.22
FDPS-201ENST00000356657 CSMD2Q7Z408 3487 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 TBX1O43435 398 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 CD8AP01732 235 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 CDK1P06493 297 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 UBCP0CG48 685 aaKnown RBP13.7□□□□□ -0.22
FDPS-201ENST00000356657 SLC2A1P11166 492 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 TGM4P49221 684 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 PSG7Q13046 419 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 NKPD1Q17RQ9 610 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 MST1LQ2TV78 715 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 TP53I3Q53FA7 332 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 CDH24Q86UP0 819 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 NAA40Q86UY6 237 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 ELMOD2Q8IZ81 293 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 TRMT61AQ96FX7 289 aaKnown RBP13.7□□□□□ -0.22
FDPS-201ENST00000356657 PBOV1Q9GZY1 135 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 DYNLRB1Q9NP97 96 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 ACOXLQ9NUZ1 547 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 PTTG3PQ9NZH4 202 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 PURGQ9UJV8 347 aaKnown RBP13.7□□□□□ -0.22
FDPS-201ENST00000356657 OR52A1Q9UKL2 312 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 CSMD1Q96PZ7 3565 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 USF3Q68DE3 2245 aa13.7□□□□□ -0.22
FDPS-201ENST00000356657 CCDC168Q8NDH2 2452 aa13.69□□□□□ -0.22
FDPS-201ENST00000356657 LOC390937A0A1W2PQ73 354 aa13.69□□□□□ -0.22
FDPS-201ENST00000356657 DHRS7CA6NNS2 312 aa13.69□□□□□ -0.22
FDPS-201ENST00000356657 IQCF6A8MYZ5 107 aa13.69□□□□□ -0.22
FDPS-201ENST00000356657 MYL12BO14950 172 aa13.69□□□□□ -0.22
FDPS-201ENST00000356657 RGS10O43665 173 aa13.69□□□□□ -0.22
FDPS-201ENST00000356657 TIMM8AO60220 97 aaPredicted RBP13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms