RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 NDUFAB1O14561 156 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 POLR1CO15160 346 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 MRPS12O15235 138 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CHMP2AO43633 222 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 RAB3DO95716 219 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 ARG1P05089 322 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 HLA-GP17693 338 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 RBM34P42696 430 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CLDN18P56856 261 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PRPS1P60891 318 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 STXBP1P61764 594 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 RPS21P63220 83 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 IFFO1Q0D2I5 559 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 NCF4Q15080 339 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 WHAMMP3Q1A5X7 153 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 LRRC36Q1X8D7 754 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PIGGQ5H8A4 983 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PLET1Q6UQ28 207 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 APRG1Q8IVJ8 170 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 LINC00469Q8N7U9 141 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 C9orf106Q8NAJ2 232 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 FGGYQ96C11 551 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 CENPNQ96H22 339 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SEC22AQ96IW7 307 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 SIGLEC12Q96PQ1 595 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 NAPGQ99747 312 aaPredicted RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 Q9H3A6 140 aa1.22□□□□□ -2.21
BRCA1-202ENST00000354071 PATZ1Q9HBE1 687 aaKnown RBP1.22□□□□□ -2.21
BRCA1-202ENST00000354071 TRAV8-7A0A075B6U6 113 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TSPAN11A1L157 253 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PRR23D1E9PI22 279 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 AGPAT2O15120 278 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF780AO75290 641 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CBR3O75828 277 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PLEKHA8P1O95397 391 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 FGF1P05230 155 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PRR23D2P0DMB1 279 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 HSPD1P10809 573 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 RAB4AP20338 218 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CCNOP22674 350 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PRKAR2BP31323 418 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 FMO3P31513 532 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CAV2P51636 162 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CCNG1P51959 295 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SLC1A5Q15758 541 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR2B11Q5JQS5 317 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 H3F3CQ6NXT2 135 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 C6orf89Q6UWU4 347 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ABHD12BQ7Z5M8 362 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SETD3Q86TU7 594 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CSNK1G2-AS1Q8NCQ2 148 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TRPV1Q8NER1 839 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ACER1Q8TDN7 264 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 FCRL1Q96LA6 429 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GLT1D1Q96MS3 346 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 RNF145Q96MT1 663 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF599Q96NL3 588 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OR51J1Q9H342 316 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 METTL17Q9H7H0 456 aaPredicted RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SIAEQ9HAT2 523 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ISYNA1Q9NPH2 558 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 NECAP2Q9NVZ3 263 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 STX18Q9P2W9 335 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CYB5R1Q9UHQ9 305 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 MOKQ9UQ07 419 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 HYOU1Q9Y4L1 999 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CELSR2Q9HCU4 2923 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TDRD6O60522 2096 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PRRC2CQ9Y520 2896 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC168Q8NDH2 2452 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ANK3Q12955 4377 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 LOC400499M0QZD8 3231 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TNFSF11O14788 317 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PFDN1O60925 122 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ACTL6AO96019 429 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 STSP08842 583 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SNRPCP09234 159 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GNAO1P09471 354 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TEAD1P28347 426 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TFPI2P48307 235 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 NDUFA8P51970 172 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 PSMC5P62195 406 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 C2orf80Q0P641 193 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 DYNC1I2Q13409 638 aaKnown RBP1.21□□□□□ -2.22
BRCA1-202ENST00000354071 COTL1Q14019 142 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 KIAA0087Q14695 138 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 RGNQ15493 299 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 GUCA2BQ16661 112 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF691Q5VV52 312 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 ZNF613Q6PF04 617 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CCDC121Q6ZUS5 278 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 AHSA2Q719I0 299 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SLC35D2Q76EJ3 337 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 TGIF2LYQ8IUE0 185 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 SYS1Q8N2H4 156 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CLHC1Q8NHS4 586 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 APH1BQ8WW43 257 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 RDH5Q92781 318 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 CREB3L1Q96BA8 519 aa1.21□□□□□ -2.22
BRCA1-202ENST00000354071 OPALINQ96PE5 141 aa1.21□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms