RNA–Protein interactions for RNA: ENST00000353578.8

COL6A3-203, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 5 BASIC

Gene COL6A3, Length 9,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-203ENST00000353578 HES1Q14469 280 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 PSAPL1Q6NUJ1 521 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 LHFPL2Q6ZUX7 228 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 OR1L3Q8NH93 324 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 BARHL1Q9BZE3 327 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 IL24Q13007 206 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 TEAD2Q15562 447 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 GLIPR1L1Q6UWM5 242 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 ACOT4Q8N9L9 421 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 OR5R1Q8NH85 324 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 EDARADDQ8WWZ3 215 aa11.51□□□□□ -0.57
COL6A3-203ENST00000353578 ABOP16442 354 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF28P17035 718 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 FABP5Q01469 135 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 FAM110CQ1W6H9 321 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 RAET1LQ5VY80 246 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 CD300LDQ6UXZ3 194 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 C6orf201Q7Z4U5 140 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 SLC25A43Q8WUT9 341 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 MCTS1Q9ULC4 181 aaKnown RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 IKZF1Q13422 519 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 PRR14Q9BWN1 585 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF749O43361 778 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF385BQ569K4 471 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 GNG12Q9UBI6 72 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 SPTBN2O15020 2390 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 DIRC3C9JPN6 131 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 OR8G3PP0DMU2 310 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 FCGR2AP12318 317 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 ARSDP51689 593 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 SNU13P55769 128 aaKnown RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 ARSJQ5FYB0 599 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 THEM4Q5T1C6 240 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 TMEM251Q8N6I4 163 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 INTS1Q8N201 2190 aaKnown RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 A0A1B0GV90 55 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 DEFB128Q7Z7B8 93 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 PNPLA1Q8N8W4 532 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 C11orf84Q9BUA3 381 aaPredicted RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 RBM24Q9BX46 236 aaKnown RBP11.5□□□□□ -0.57
COL6A3-203ENST00000353578 TNFRSF10CO14798 259 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 OLIG2Q13516 323 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 GDF7Q7Z4P5 450 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 ACVR1CQ8NER5 493 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 OR5AR1Q8NGP9 310 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 TMEM70Q9BUB7 260 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 MYO7BQ6PIF6 2116 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 TMEM189-UBE2V1I3L0A0 370 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 PRF1P14222 555 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 PRLHRP49683 370 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 DIO1P49895 249 aa11.5□□□□□ -0.57
COL6A3-203ENST00000353578 HELTA6NFD8 242 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 BSXQ3C1V8 233 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 TAAR6Q96RI8 345 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 HSFX1Q9UBD0 423 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 C7orf77A4D0Y5 90 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SLC17A2O00624 439 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SEC11BP0C7V7 166 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 RHOBP62745 196 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 MPV17LQ2QL34 196 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 TCTN2Q96GX1 697 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 WDR92Q96MX6 357 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 C7orf66A4D0T2 115 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PLSCR1O15162 318 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PHF19Q5T6S3 580 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 RNF165Q6ZSG1 346 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 Q6ZVU0 165 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 MRGPRGQ86SM5 289 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 NPWQ8N729 165 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PHIPQ8WWQ0 1821 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 AHCTF1Q8WYP5 2266 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 G3V3Y1 287 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 DUX1O43812 170 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SMIM17P0DL12 118 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 IRS1P35568 1242 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 LEXMQ3ZCV2 418 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 OR5A2Q8NGI9 324 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 HRASLS2Q9NWW9 162 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 TRAPPC2LQ9UL33 140 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 CLDN16Q9Y5I7 305 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PLSCR5A0PG75 271 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 TTRP02766 147 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 ZNF17P17021 662 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 CD68P34810 354 aaPredicted RBP11.49□□□□□ -0.57
COL6A3-203ENST00000353578 P2RY1P47900 373 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 GABREP78334 506 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SLC25A30Q5SVS4 291 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 CARD17Q5XLA6 110 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 MRPL38Q96DV4 380 aaKnown RBP11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PIK3IP1Q96FE7 263 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 MIXL1Q9H2W2 232 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 UBTD1Q9HAC8 227 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 PYCARD-AS1I3L0S3 204 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 HOXC13P31276 330 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 OR5M1Q8NGP8 315 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 RAB37Q96AX2 223 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 ASB16Q96NS5 453 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 SLAMF8Q9P0V8 285 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 BMPR1AP36894 532 aa11.49□□□□□ -0.57
COL6A3-203ENST00000353578 VIPR2P41587 438 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms