RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 HRASLS5Q96KN8 279 aa18.72■□□□□ 0.59
SNX3-202ENST00000349379 IL19Q9UHD0 177 aa18.72■□□□□ 0.59
SNX3-202ENST00000349379 LRP5LA4QPB2 252 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 XRCC2O43543 280 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 H2BFMP0C1H6 154 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 TNFSF4P23510 183 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 GZMKP49863 264 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 HCCSP53701 268 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 ZNF121P58317 390 aaPredicted RBP18.71■□□□□ 0.59
SNX3-202ENST00000349379 C6orf52Q5T4I8 152 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 MRPL21Q7Z2W9 205 aaKnown RBP18.71■□□□□ 0.59
SNX3-202ENST00000349379 HPS1Q92902 700 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 CNN2Q99439 309 aaKnown RBP18.71■□□□□ 0.59
SNX3-202ENST00000349379 OPA3Q9H6K4 179 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 ADGRL4Q9HBW9 690 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 H2AFY2Q9P0M6 372 aaPredicted RBP18.71■□□□□ 0.59
SNX3-202ENST00000349379 LAMP5Q9UJQ1 280 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 COPS3Q9UNS2 423 aa18.71■□□□□ 0.59
SNX3-202ENST00000349379 ANK3Q12955 4377 aaKnown RBP18.71■□□□□ 0.59
SNX3-202ENST00000349379 CD300LBA8K4G0 201 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 MRPL3P09001 348 aaKnown RBP18.7■□□□□ 0.58
SNX3-202ENST00000349379 HOXB4P17483 251 aaPredicted RBP18.7■□□□□ 0.58
SNX3-202ENST00000349379 HFEQ30201 348 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 DEGS2Q6QHC5 323 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 LRRN1Q6UXK5 716 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 BHLHE23Q8NDY6 225 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 OR52H1Q8NGJ2 320 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 ITLN1Q8WWA0 313 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 C1orf159Q96HA4 380 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 SLC29A1Q99808 456 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 SOX7Q9BT81 388 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 NIPAL2Q9H841 368 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 SP140LQ9H930 580 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 ZNF319Q9P2F9 582 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 ORC6Q9Y5N6 252 aa18.7■□□□□ 0.58
SNX3-202ENST00000349379 PRR32B1ATL7 298 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 WNT9BO14905 357 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 PPIHO43447 177 aaKnown RBP18.69■□□□□ 0.58
SNX3-202ENST00000349379 ANXA2P07355 339 aaKnown RBP18.69■□□□□ 0.58
SNX3-202ENST00000349379 TNFRSF1AP19438 455 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 HTR1FP30939 366 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 IL2RGP31785 369 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 PSMA6P60900 246 aaKnown RBP18.69■□□□□ 0.58
SNX3-202ENST00000349379 ROM1Q03395 351 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 GABPB1Q06547 395 aaPredicted RBP18.69■□□□□ 0.58
SNX3-202ENST00000349379 CYB5R2Q6BCY4 276 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 OR10AD1Q8NGE0 317 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 TRUB1Q8WWH5 349 aaKnown RBP18.69■□□□□ 0.58
SNX3-202ENST00000349379 SGK3Q96BR1 496 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 OR2V2Q96R30 315 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 MBOAT4Q96T53 435 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 MNTQ99583 582 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 DNAJC27Q9NZQ0 273 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 WARS2Q9UGM6 360 aaKnown RBP18.69■□□□□ 0.58
SNX3-202ENST00000349379 LRP12Q9Y561 859 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 TMEM14AQ9Y6G1 99 aa18.69■□□□□ 0.58
SNX3-202ENST00000349379 CLDN25C9JDP6 229 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 INAFM1C9JVW0 142 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 H0YL77 283 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 SBK2P0C263 348 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 CDC42P60953 191 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 ZSCAN26Q16670 478 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 ZIK1Q3SY52 487 aaPredicted RBP18.68■□□□□ 0.58
SNX3-202ENST00000349379 KCTD18Q6PI47 426 aaPredicted RBP18.68■□□□□ 0.58
SNX3-202ENST00000349379 ZBTB49Q6ZSB9 765 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 FAM57BQ71RH2 274 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 HIST2H2ABQ8IUE6 130 aaPredicted RBP18.68■□□□□ 0.58
SNX3-202ENST00000349379 CLDND2Q8NHS1 167 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 FAM81AQ8TBF8 368 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 CCL17Q92583 94 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 STMN2Q93045 179 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 EME1Q96AY2 570 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 MSI2Q96DH6 328 aaKnown RBP18.68■□□□□ 0.58
SNX3-202ENST00000349379 MEGF10Q96KG7 1140 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 OR8B4Q96RC9 309 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 TMEM100Q9NV29 134 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 WIPI2Q9Y4P8 454 aa18.68■□□□□ 0.58
SNX3-202ENST00000349379 ZNF16P17020 682 aaPredicted RBP18.67■□□□□ 0.58
SNX3-202ENST00000349379 DCTDP32321 178 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 FAM3AP98173 230 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 SLC3A1Q07837 685 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 TMED1Q13445 227 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 SLC25A30Q5SVS4 291 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 RFLNBQ8N5W9 214 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 ASB17Q8WXJ9 295 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 UBE2FQ969M7 185 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 SLC22A4Q9H015 551 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 CLN6Q9NWW5 311 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 DCAF16Q9NXF7 216 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 TREM2Q9NZC2 230 aa18.67■□□□□ 0.58
SNX3-202ENST00000349379 NF1P21359 2839 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 hCG_38984A0A1B0GV85 526 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 GGT3PA6NGU5 568 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 TBX1O43435 398 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 ZNF254O75437 659 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 HLA-DPB1P04440 258 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 TIGD6Q17RP2 521 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 AVPI1Q5T686 147 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 KRT77Q7Z794 578 aa18.66■□□□□ 0.58
SNX3-202ENST00000349379 SLC35F2Q8IXU6 374 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 179.1 ms