RNA–Protein interactions for RNA: ENST00000347559.6

LMNA-201, Transcript of lamin A/C, humanhuman

TSL 5 BASIC

Gene LMNA, Length 3,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-201ENST00000347559 SLC26A1Q9H2B4 701 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 LMAN1LQ9HAT1 526 aa13.71□□□□□ -0.21
LMNA-201ENST00000347559 SDCBPO00560 298 aaPredicted RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 CFPP27918 469 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 RPS15AP62244 130 aaKnown RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 PHF19Q5T6S3 580 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 TMEM268Q5VZI3 342 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 SLC39A11Q8N1S5 342 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 OR10G6Q8NH81 332 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 POM121Q96HA1 1249 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 ASB16Q96NS5 453 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 SPACA5Q96QH8 159 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 HIF3AQ9Y2N7 669 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 XKRYO14609 159 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 TAAR5O14804 337 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 PPP1R2P9O14990 202 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 S1PR1P21453 382 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 GLRA1P23415 457 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 MGAT2Q10469 447 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 PDGFRLQ15198 375 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 DHCR24Q15392 516 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 KTI12Q96EK9 354 aaPredicted RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 GPX7Q96SL4 187 aaPredicted RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 STARD5Q9NSY2 213 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 FAM212BQ9NTI7 297 aaPredicted RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 DNAJB11Q9UBS4 358 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 RAB22AQ9UL26 194 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 SPACA6W5XKT8 324 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 FANCMQ8IYD8 2048 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 KNL1Q8NG31 2342 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 LOC107986453A0A1B0GWG9 222 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 LDLRAD4O15165 306 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 TCAPO15273 167 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 SLC16A7O60669 478 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 RAMP1O60894 148 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 TXNDC12O95881 172 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 ZP2Q05996 745 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 ELAVL3Q14576 367 aaKnown RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 IAH1Q2TAA2 248 aaPredicted RBP13.7□□□□□ -0.22
LMNA-201ENST00000347559 SLC18B1Q6NT16 456 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 ZNF610Q8N9Z0 462 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 RSPRY1Q96DX4 576 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 NICN1Q9BSH3 213 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 HHLA2Q9UM44 414 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 HDGFL3Q9Y3E1 203 aa13.7□□□□□ -0.22
LMNA-201ENST00000347559 A0A0A6YYH2 397 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 A6NJ64 397 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 SOD3P08294 240 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 LSM6P62312 80 aaKnown RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 SUPT4H1P63272 117 aaKnown RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 UNC119Q13432 240 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 HNRNPA1L2Q32P51 320 aaKnown RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 TMEM52BQ4KMG9 183 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 KHDC3LQ587J8 217 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 SOHLH1Q5JUK2 328 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 RPUSD3Q6P087 351 aaKnown RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 ZNF101Q8IZC7 436 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 PNLDC1Q8NA58 520 aaKnown RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 KREMEN2Q8NCW0 462 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 TCTN2Q96GX1 697 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 S100A13Q99584 98 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 TCEAL2Q9H3H9 227 aaPredicted RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 MMP25Q9NPA2 562 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 MKI67P46013 3256 aaKnown RBP13.69□□□□□ -0.22
LMNA-201ENST00000347559 FREM3P0C091 2139 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 K7EQS6 105 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 JTBO76095 146 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 QDPRP09417 244 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 BIKQ13323 160 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 LRRC75AQ8NAA5 344 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 POC1AQ8NBT0 407 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 SLC35B3Q9H1N7 401 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 CRLF2Q9HC73 371 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 CA14Q9ULX7 337 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 GPR132Q9UNW8 380 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 WASF3Q9UPY6 502 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 LRP12Q9Y561 859 aa13.69□□□□□ -0.22
LMNA-201ENST00000347559 MEGF11A6BM72 1044 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 SERINC4A6NH21 518 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 P2RY10O00398 339 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 NUDT21O43809 227 aaKnown RBP13.68□□□□□ -0.22
LMNA-201ENST00000347559 ZNF708P17019 499 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 SERPINA2P20848 420 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 FAM78AQ5JUQ0 283 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 OR52N4Q8NGI2 321 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 OR14K1Q8NGZ2 314 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 ERGIC1Q969X5 290 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 FGGYQ96C11 551 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 SLC25A36Q96CQ1 311 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 POLE3Q9NRF9 147 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 MPZL1O95297 269 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 APBB3O95704 486 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 IGFBP3P17936 291 aaPredicted RBP13.68□□□□□ -0.22
LMNA-201ENST00000347559 WASP42768 502 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 SPCS3P61009 180 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 PKIAP61925 76 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 NKX6-1P78426 367 aaPredicted RBP13.68□□□□□ -0.22
LMNA-201ENST00000347559 SPEM2Q0P670 501 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 C4orf17Q53FE4 359 aa13.68□□□□□ -0.22
LMNA-201ENST00000347559 C19orf47Q8N9M1 422 aaKnown RBP13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms