RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 VRK1Q99986 396 aaPredicted RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 CACNG6Q9BXT2 260 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 MRPL37Q9BZE1 423 aaKnown RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 GSX2Q9BZM3 304 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 RGCCQ9H4X1 137 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 ZNF701Q9NV72 531 aaPredicted RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 MRPS18AQ9NVS2 196 aaKnown RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 CHCHD3Q9NX63 227 aaKnown RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 TAAR3PQ9P1P4 343 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 ZNF391Q9UJN7 358 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 FZR1Q9UM11 496 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 EXOGQ9Y2C4 368 aaKnown RBP10.16□□□□□ -0.78
SNCA-202ENST00000345009 LRP12Q9Y561 859 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 N6AMT1Q9Y5N5 214 aa10.16□□□□□ -0.78
SNCA-202ENST00000345009 PDZD2O15018 2839 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 IGLV3-9A0A075B6K5 115 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 TMEM269A0A1B0GVZ9 245 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 A0A1W2PQL4 384 aaPredicted RBP10.15□□□□□ -0.78
SNCA-202ENST00000345009 EFCAB10A6NFE3 127 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 TBX1O43435 398 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 APOL3O95236 402 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 GNAO1P09471 354 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 PSKH1P11801 424 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 DCKP27707 260 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 ATP5J2P56134 94 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 ZNF121P58317 390 aaPredicted RBP10.15□□□□□ -0.78
SNCA-202ENST00000345009 PSMA6P60900 246 aaKnown RBP10.15□□□□□ -0.78
SNCA-202ENST00000345009 ERVS71-1P61550 626 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 ACTA2P62736 377 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 ACTG2P63267 376 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 CDK5R2Q13319 367 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 TIGD6Q17RP2 521 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 MST1LQ2TV78 715 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 PCGF3Q3KNV8 242 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 C11orf71Q6IPW1 123 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 USP51Q70EK9 711 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 MRPL21Q7Z2W9 205 aaKnown RBP10.15□□□□□ -0.78
SNCA-202ENST00000345009 YIPF7Q8N8F6 280 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 CNIH3Q8TBE1 160 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 CMBLQ96DG6 245 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 LGALS12Q96DT0 336 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 DIRC2Q96SL1 478 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 AMELYQ99218 206 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 TBX5Q99593 518 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 FOXC2Q99958 501 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 AMBNQ9NP70 447 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 BRD7Q9NPI1 651 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 SCN3BQ9NY72 215 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 PTTG3PQ9NZH4 202 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 AASSQ9UDR5 926 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 ZDHHC8Q9ULC8 765 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 RAB26Q9ULW5 256 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 KLHDC2Q9Y2U9 406 aa10.15□□□□□ -0.78
SNCA-202ENST00000345009 NOP16Q9Y3C1 178 aaKnown RBP10.15□□□□□ -0.78
SNCA-202ENST00000345009 TMEM129A0AVI4 362 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 METTL15A6NJ78 407 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 WBP4O75554 376 aaKnown RBP10.14□□□□□ -0.79
SNCA-202ENST00000345009 CLPTM1O96005 669 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 ADRA2AP08913 450 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 SLC2A1P11166 492 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 MYL12AP19105 171 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 KITLGP21583 273 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 TNFSF4P23510 183 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 CDKN1AP38936 164 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 DDOSTP39656 456 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 PTH2RP49190 550 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 PSG7Q13046 419 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 FAM209AQ5JX71 171 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 FAM57BQ71RH2 274 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 NAA40Q86UY6 237 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 LRP11Q86VZ4 500 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 FTMTQ8N4E7 242 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 HAVCR2Q8TDQ0 301 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 APH1BQ8WW43 257 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 SPRYD4Q8WW59 207 aaPredicted RBP10.14□□□□□ -0.79
SNCA-202ENST00000345009 NEU4Q8WWR8 484 aaPredicted RBP10.14□□□□□ -0.79
SNCA-202ENST00000345009 IGFBPL1Q8WX77 278 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 PERPQ96FX8 193 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 ZNF184Q99676 751 aaPredicted RBP10.14□□□□□ -0.79
SNCA-202ENST00000345009 ANKRD60Q9BZ19 345 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 MOB1AQ9H8S9 216 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 PURGQ9UJV8 347 aaKnown RBP10.14□□□□□ -0.79
SNCA-202ENST00000345009 ITGB1BP2Q9UKP3 347 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 COPS3Q9UNS2 423 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 SNX5Q9Y5X3 404 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 ARFGEF3Q5TH69 2177 aa10.14□□□□□ -0.79
SNCA-202ENST00000345009 GGT3PA6NGU5 568 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 LOC110117498-PIK3R3F6TDL0 507 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 PSMD9O00233 223 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 RPSAP08865 295 aaKnown RBP10.13□□□□□ -0.79
SNCA-202ENST00000345009 MYF6P23409 242 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 MPV17P39210 176 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 ZNF81P51508 661 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 EFNA4P52798 201 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 ART1P52961 327 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 MRPL28Q13084 256 aaKnown RBP10.13□□□□□ -0.79
SNCA-202ENST00000345009 GK2Q14410 553 aaPredicted RBP10.13□□□□□ -0.79
SNCA-202ENST00000345009 HLXQ14774 488 aaPredicted RBP10.13□□□□□ -0.79
SNCA-202ENST00000345009 SHEQ5VZ18 495 aa10.13□□□□□ -0.79
SNCA-202ENST00000345009 PRSS57Q6UWY2 283 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms