RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 LSAMPQ13449 338 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ZNF355PQ9NSJ1 428 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 CGGBP1Q9UFW8 167 aaPredicted RBP14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ARID2Q68CP9 1835 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 TIAF1O95411 115 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ZNF728P0DKX0 622 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 LY6DQ14210 128 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 TFAP2EQ6VUC0 442 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 RBMX2Q9Y388 322 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 PCNX1Q96RV3 2341 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ZNF17P17021 662 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 SNCAP37840 140 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 FAM185AQ8N0U4 392 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 SGK3Q96BR1 496 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ZG16BQ96DA0 208 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 TGIF2Q9GZN2 237 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 SLC25A31Q9H0C2 315 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 KLK13Q9UKR3 277 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 RCE1Q9Y256 329 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 IGHV1-45A0A0A0MS14 117 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 PPIHO43447 177 aaKnown RBP14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 TGM4P49221 684 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 FUT6P51993 359 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 SPCS2Q15005 226 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 PCK2Q16822 640 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 CCDC71Q8IV32 467 aaPredicted RBP14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 SLC30A7Q8NEW0 376 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 BBS1Q8NFJ9 593 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ZNF721Q8TF20 911 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 C7orf34Q96L11 122 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 ARL6Q9H0F7 186 aa14.68□□□□□ -0.06
SMARCA4-201ENST00000344626 PCM1Q15154 2024 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 PLPP3O14495 311 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 OR13F1Q8NGS4 319 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 OR4A16Q8NH70 328 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 OTOSQ8NHW6 89 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 TERTO14746 1132 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 PTAFRP25105 342 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 MFGE8Q08431 387 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 APOOLQ6UXV4 268 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 C12orf45Q8N5I9 185 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 HAS2Q92819 552 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 MT-ND4P03905 459 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 RBMS2Q15434 407 aaKnown RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 CMTM4Q8IZR5 234 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 NPEPL1Q8NDH3 523 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 OR10J5Q8NHC4 309 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 SMIM19Q96E16 107 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 TTTY12Q9BZ98 90 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 FGF20Q9NP95 211 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 JUNBP17275 347 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 THBS4P35443 961 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 BHLHA15Q7RTS1 189 aaPredicted RBP14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 MRGPRGQ86SM5 289 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 OR4D6Q8NGJ1 314 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 MCHR2Q969V1 340 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 CKAP5Q14008 2032 aa14.67□□□□□ -0.06
SMARCA4-201ENST00000344626 OR8U9P0C7N5 309 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 CPEP16870 476 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 AKR1C8PQ5T2L2 129 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 C6orf183Q5T699 404 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 C9orf40Q8IXQ3 194 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 GPR32P1Q8NGA4 272 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 OR6X1Q8NH79 312 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 PP6455Q8WZ26 134 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 C19orf67A6NJJ6 358 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 DNPH1O43598 174 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 HLA-HP01893 362 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 SLC35A2P78381 396 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 UNQ6494/PRO21346Q6UXR6 183 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 ASCL5Q7RTU5 278 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 TMEM52Q8NDY8 209 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 RPL3LQ92901 407 aaKnown RBP14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 FCRL1Q96LA6 429 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 FZR1Q9UM11 496 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 TOXO94900 526 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 HEPHL1Q6MZM0 1159 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 ACKR4Q9NPB9 350 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 PRSS44E7EML9 344 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 CDK5R1Q15078 307 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 PRSS35Q8N3Z0 413 aa14.66□□□□□ -0.06
SMARCA4-201ENST00000344626 HAAOP46952 286 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 TMEM171Q8WVE6 324 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 DCUN1D4Q92564 292 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 C1orf123Q9NWV4 160 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 GFOD1Q9NXC2 390 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 CTDSP2O14595 271 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 WISP3O95389 354 aaPredicted RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 GIFP27352 417 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 PCBP3P57721 371 aaKnown RBP14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 BANF2Q9H503 90 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 C16orf97H3BN30 126 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 MED6O75586 246 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 S100A6P06703 90 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 PCSK6P29122 969 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 SPAG16Q8N0X2 631 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 OR2M3Q8NG83 312 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 OR8B4Q96RC9 309 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 SLC26A1Q9H2B4 701 aa14.65□□□□□ -0.06
SMARCA4-201ENST00000344626 IL7P13232 177 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms