RNA–Protein interactions for RNA: ENST00000344376.9

ATG4B-201, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 1,566 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-201ENST00000344376 KLHL36Q8N4N3 616 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 SLC22A4Q9H015 551 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 TOR3AQ9H497 397 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 OPA3Q9H6K4 179 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 SP140LQ9H930 580 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 GCM1Q9NP62 436 aa13.57□□□□□ -0.24
ATG4B-201ENST00000344376 PAPOLBQ9NRJ5 636 aaKnown RBP13.57□□□□□ -0.24
ATG4B-201ENST00000344376 ATRQ13535 2644 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 A0A0G2JMP0 313 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 A0A0X1KG70 313 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 GGT3PA6NGU5 568 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 LRRC30A6NM36 301 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 RNF212BA8MTL3 300 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 PHF1O43189 567 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-201ENST00000344376 PRODHO43272 600 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 PLPP2O43688 288 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 PNPP00491 289 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 SCGB2A2Q13296 93 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 SNAI3Q3KNW1 292 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 TMEM155Q4W5P6 130 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 KLHL12Q53G59 568 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 C1orf146Q5VVC0 180 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 FAHD2BQ6P2I3 314 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-201ENST00000344376 DPY19L4Q7Z388 723 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 MUC20Q8N307 709 aaPredicted RBP13.56□□□□□ -0.24
ATG4B-201ENST00000344376 OR4M2Q8NGB6 313 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 TMEM158Q8WZ71 300 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 FAHD2AQ96GK7 314 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 MARCH7Q9H992 704 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 SLC25A19Q9HC21 320 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 DCAF16Q9NXF7 216 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 N6AMT1Q9Y5N5 214 aa13.56□□□□□ -0.24
ATG4B-201ENST00000344376 CD300LBA8K4G0 201 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 F5H5P2 479 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 MLNRO43193 412 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 MDH2P40926 338 aaKnown RBP13.55□□□□□ -0.24
ATG4B-201ENST00000344376 CX3CR1P49238 355 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 PRSS12P56730 875 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 CDK5Q00535 292 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 ZNF92Q03936 586 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 C1orf87Q8N0U7 546 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 CELF2-AS1Q8N7Q2 184 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 OR5K1Q8NHB7 308 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 ZMYND19Q96E35 227 aaPredicted RBP13.55□□□□□ -0.24
ATG4B-201ENST00000344376 PRRG3Q9BZD7 231 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 NTN4Q9HB63 628 aa13.55□□□□□ -0.24
ATG4B-201ENST00000344376 A0A1B0GWJ7 208 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 H0YL77 283 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 TMEM178BH3BS89 294 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 XRCC2O43543 280 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 FOXH1O75593 365 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 CIB2O75838 187 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 HLA-DPB1P04440 258 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ANXA2P07355 339 aaKnown RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 SLC2A1P11166 492 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 FCGR1AP12314 374 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 IRF2P14316 349 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 RPS7P62081 194 aaKnown RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 OR8G1Q15617 311 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ATP6AP1Q15904 470 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 SLC35D3Q5M8T2 416 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 GLYATL3Q5SZD4 288 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 MOGAT3Q86VF5 341 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 LRRC28Q86X40 367 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 CPOQ8IVL8 374 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 PARP8Q8N3A8 854 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ZNF454Q8N9F8 522 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 OR2AE1Q8NHA4 323 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 RNF133Q8WVZ7 376 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 SIGLEC11Q96RL6 698 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ABHD6Q9BV23 337 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 REPIN1Q9BWE0 567 aaKnown RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 TANC2Q9HCD6 1990 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 J3QLI3 93 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 TBX1O43435 398 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 GATA3P23771 443 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 FASP25445 335 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 CRISP1P54107 249 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ZMYND11Q15326 602 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 SNAPC1Q16533 368 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ZNF181Q2M3W8 571 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 DCAF12L2Q5VW00 463 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 FAHD1Q6P587 224 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 RHOUQ7L0Q8 258 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 TIGD4Q8IY51 512 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 OR11L1Q8NGX0 322 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ZNF420Q8TAQ5 688 aaPredicted RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ERGIC1Q969X5 290 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 ADAT1Q9BUB4 502 aaKnown RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 G6PC2Q9NQR9 355 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 MRPL15Q9P015 296 aaKnown RBP13.54□□□□□ -0.24
ATG4B-201ENST00000344376 METRNQ9UJH8 293 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 AP4S1Q9Y587 144 aa13.54□□□□□ -0.24
ATG4B-201ENST00000344376 GMDSO60547 372 aa13.53□□□□□ -0.24
ATG4B-201ENST00000344376 LYNP07948 512 aa13.53□□□□□ -0.24
ATG4B-201ENST00000344376 H2BFMP0C1H6 154 aa13.53□□□□□ -0.24
ATG4B-201ENST00000344376 CA6P23280 308 aa13.53□□□□□ -0.24
ATG4B-201ENST00000344376 CFL1P23528 166 aaKnown RBP13.53□□□□□ -0.24
ATG4B-201ENST00000344376 CD200P41217 278 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms