RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 HDGFL3Q9Y3E1 203 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 FAM221AA4D161 298 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ANKUB1A6NFN9 424 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 MSTNO14793 375 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 FOXS1O43638 330 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ZNF121P58317 390 aaPredicted RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 TFF2Q03403 129 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 CD200R1LQ6Q8B3 271 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ZNF687Q8N1G0 1237 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 BATF2Q8N1L9 274 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 KCNRGQ8N5I3 272 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SLC38A9Q8NBW4 561 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 PPP1R35Q8TAP8 253 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SCMH1Q96GD3 660 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 OR5B12Q96R08 314 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 PARP12Q9H0J9 701 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 SLC17A5Q9NRA2 495 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 PILRAQ9UKJ1 303 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 PUS1Q9Y606 427 aaKnown RBP eCLIP6.46□□□□□ -1.38
VCAN-202ENST00000342785 FAHP16930 419 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 MECP2P51608 486 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 CAMK2BQ13554 666 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 PAN3Q58A45 887 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 TMEM229BQ8NBD8 167 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 OR4D6Q8NGJ1 314 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 CMBLQ96DG6 245 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 DHRS9Q9BPW9 319 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 PIKFYVEQ9Y2I7 2098 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 WNK3Q9BYP7 1800 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SRPXP78539 464 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SMAD4Q13485 552 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 AANATQ16613 207 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 MESTQ5EB52 335 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ARRDC1Q8N5I2 433 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 OR14K1Q8NGZ2 314 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SGK3Q96BR1 496 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ARL5BQ96KC2 179 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SLC25A32Q9H2D1 315 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 EXOSC3Q9NQT5 275 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 SCN3AQ9NY46 2000 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 SPTAN1Q13813 2472 aaKnown RBP6.46□□□□□ -1.38
VCAN-202ENST00000342785 SDK2Q58EX2 2172 aa6.46□□□□□ -1.38
VCAN-202ENST00000342785 ANKRD20A5PA0PJZ0 165 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 RFPL4AA6NLU0 287 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 RFPL4AL1F8VTS6 287 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 LGALS8O00214 317 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 MPZL1O95297 269 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 SCAND1P57086 179 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 DHRS2Q13268 280 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 PLA1AQ53H76 456 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OR52H1Q8NGJ2 320 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OR51A4Q8NGJ6 313 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OR14J1Q9UGF5 321 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 CCDC88CQ9P219 2028 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 RER1O15258 196 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OIP5O43482 229 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 GCH1P30793 250 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 RBM39Q14498 530 aaKnown RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 NHLRC1Q6VVB1 395 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 DGAT2L6Q6ZPD8 337 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 CNEP1R1Q8N9A8 125 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TCTEX1D2Q8WW35 142 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 FRRS1LQ9P0K9 344 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 KIF25Q9UIL4 384 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ZNF223Q9UK11 482 aaPredicted RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 TRAV8-7A0A075B6U6 113 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ALDH3B1P43353 468 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 COMTD1Q86VU5 262 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ARHGEF39Q8N4T4 335 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 SPICQ8N5J4 248 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OR6K3Q8NGY3 331 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OR51F2Q8NH61 342 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OCSTAMPQ9BR26 566 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 C12orf10Q9HB07 376 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 NECAP2Q9NVZ3 263 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 KCNE5Q9UJ90 142 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 SF3B6Q9Y3B4 125 aaKnown RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 FBXO7Q9Y3I1 522 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 NEUROG3Q9Y4Z2 214 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TIMM10BQ9Y5J6 103 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TNS1Q9HBL0 1735 aaKnown RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 IGHV1OR15-9A0A0B4J2B8 117 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 RPS10-NUDT3A0A1W2PQS6 291 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 C7orf66A4D0T2 115 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 TUBAL3A6NHL2 446 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ACSM4P0C7M7 580 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 CD80P33681 288 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 RPS10P46783 165 aaKnown RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 AADACL3Q5VUY0 350 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 PLPP5Q8NEB5 264 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 OR13C8Q8NGS7 320 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 CPNE4Q96A23 557 aaPredicted RBP6.45□□□□□ -1.38
VCAN-202ENST00000342785 OBP2BQ9NPH6 170 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 DNAJB11Q9UBS4 358 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 YKT6O15498 198 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ANGPTL7O43827 346 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 EPPINO95925 133 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 CD96P40200 585 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 ECI1P42126 302 aa6.45□□□□□ -1.38
VCAN-202ENST00000342785 IDH3GP51553 393 aaPredicted RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms