RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 TAF9Q16594 264 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 TCTN1Q2MV58 587 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 CHRDL2Q6WN34 429 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 OTOSQ8NHW6 89 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 MRPS2Q9Y399 296 aaKnown RBP11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 PRSS37A4D1T9 235 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 TMEM229AB2RXF0 380 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 PIN1P1O15428 100 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 CST7O76096 145 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 CT62P0C5K7 136 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 IGFBP4P22692 258 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 HFEQ30201 348 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 VWA2Q5GFL6 755 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 OR56B2PQ8NGI1 322 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 INTS12Q96CB8 462 aaKnown RBP11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 DEFB126Q9BYW3 111 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 SFXN1Q9H9B4 322 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 TNFSF18Q9UNG2 199 aa11.29□□□□□ -0.6
SSX2IP-201ENST00000342203 ZNF638Q14966 1978 aaKnown RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 STRCP1A6NGW2 1772 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 SBF2Q86WG5 1849 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 BTBD17A6NE02 478 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 H3BP45 60 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 SERPINA7P05543 415 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 EEF1A1P68104 462 aaKnown RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 FAM78AQ5JUQ0 283 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ZNF610Q8N9Z0 462 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 OR52N5Q8NH56 324 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 BMFQ96LC9 184 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 SEC11CQ9BY50 192 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 CREBZFQ9NS37 354 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 LPAR3Q9UBY5 353 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 LRP12Q9Y561 859 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ARPC3O15145 178 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 PIGCQ92535 297 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 MAP3K3Q99759 626 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 NRIP2Q9BQI9 281 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 CD300LBA8K4G0 201 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 SULT2B1O00204 365 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ABOP16442 354 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 RCC1P18754 421 aaPredicted RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 CTHP32929 405 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ELLP55199 621 aaPredicted RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 TLE4Q04727 773 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 PLXDC2Q6UX71 529 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 NPEPL1Q8NDH3 523 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ASB13Q8WXK3 278 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 SLAMF6Q96DU3 332 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 EDEM2Q9BV94 578 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 GPR84Q9NQS5 396 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 COL16A1Q07092 1604 aaPredicted RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 A8MXK9 166 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 DNASE2O00115 360 aaPredicted RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 CTSVO60911 334 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 MPZL1O95297 269 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 THBS2P35442 1172 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 CBLN3Q6UW01 205 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ZNF595Q8IYB9 648 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ZNF383Q8NA42 475 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 ADAD2Q8NCV1 583 aaKnown RBP11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 PRRX2Q99811 253 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 HAO2Q9NYQ3 351 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 PIPOXQ9P0Z9 390 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 COL4A5P29400 1685 aa11.28□□□□□ -0.6
SSX2IP-201ENST00000342203 DUS4LO95620 317 aaKnown RBP11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 RAB5AP20339 215 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 MALLQ13021 153 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 TFAP2EQ6VUC0 442 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 LGI3Q8N145 548 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 LCORQ96JN0 433 aaPredicted RBP11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 LRFN5Q96NI6 719 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 NPDC1Q9NQX5 325 aaPredicted RBP11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 DOCK3Q8IZD9 2030 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 OR4C45A6NMZ5 311 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 TIMP1P01033 207 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 IGHG1P01857 330 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 RPS15P62841 145 aaKnown RBP11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 HTRA3P83110 453 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 FMODQ06828 376 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 LFNGQ8NES3 379 aa11.27□□□□□ -0.6
SSX2IP-201ENST00000342203 A0A087X0M5 115 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 A0A1B0GX30 115 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 C4orf47A7E2U8 309 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 GPR37O15354 613 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 ZNF205O95201 554 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 CST4P01036 141 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 NKX2-1P43699 371 aaPredicted RBP11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 C15orf54Q8N8G6 183 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 EMG1Q92979 244 aaKnown RBP11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 PIK3IP1Q96FE7 263 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 NKX2-4Q9H2Z4 354 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 PLK3Q9H4B4 646 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 ZNF286AQ9HBT8 521 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 LYRM4Q9HD34 91 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 DNAJB12Q9NXW2 375 aaKnown RBP11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 A8MVM7 634 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 PPP5D1E7EU14 171 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 GALR3O60755 368 aaPredicted RBP11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 BPNT1O95861 308 aa11.27□□□□□ -0.61
SSX2IP-201ENST00000342203 HLA-HP01893 362 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms