RNA–Protein interactions for RNA: ENST00000341947.6

COL11A2-201, Transcript of collagen type XI alpha 2 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL11A2, Length 6,425 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-201ENST00000341947 SDCBPO00560 298 aaPredicted RBP13.78□□□□□ -0.2
COL11A2-201ENST00000341947 FCMRO60667 390 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 SLC25A6P12236 298 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 FBXW5Q969U6 566 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 SLC25A19Q9HC21 320 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 LINC01387J3KSC0 135 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 OR2F2O95006 317 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 TNFRSF1AP19438 455 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 OR2F1Q13607 317 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 Q6ZNB5 142 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 MOB3BQ86TA1 216 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 OSR2Q8N2R0 312 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 MFSD4AQ8N468 514 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 OR5M9Q8NGP3 310 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 LINC00615Q96LM1 132 aaPredicted RBP13.78□□□□□ -0.2
COL11A2-201ENST00000341947 LRRC61Q9BV99 259 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 PIGMQ9H3S5 423 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 TRGV5A0A0B4J1U4 118 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 PIAS2O75928 621 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 CTSLP07711 333 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 ZNF121P58317 390 aaPredicted RBP13.78□□□□□ -0.2
COL11A2-201ENST00000341947 NUDT8Q8WV74 236 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 DDOQ99489 341 aa13.78□□□□□ -0.2
COL11A2-201ENST00000341947 NUDT19A8MXV4 375 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 SPRY3O43610 288 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 PRKNO60260 465 aaPredicted RBP13.77□□□□□ -0.2
COL11A2-201ENST00000341947 GLI4P10075 376 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 PLAC9Q5JTB6 97 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 SIGLEC11Q96RL6 698 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 ZNF835Q9Y2P0 537 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 ZAR1LA6NP61 321 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 CXCL10P02778 98 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 FUT6P51993 359 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 LCN15Q6UWW0 184 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 SLC35B4Q969S0 331 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 GALMQ96C23 342 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 ST3GAL6Q9Y274 331 aa13.77□□□□□ -0.2
COL11A2-201ENST00000341947 TRAV17A0A0B4J275 112 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 LMO7DNF2Z398 122 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 H7BYZ3 331 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 DGCR2P98153 550 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 BTLAQ7Z6A9 289 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 OR2T6Q8NHC8 308 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 APOBEC3DQ96AK3 386 aaPredicted RBP13.77□□□□□ -0.21
COL11A2-201ENST00000341947 MOB3AQ96BX8 217 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 PELI1Q96FA3 418 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 TRMT61AQ96FX7 289 aaKnown RBP13.77□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF251Q9BRH9 671 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 TBX21Q9UL17 535 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 NCBP2LA6PVI3 153 aaKnown RBP13.77□□□□□ -0.21
COL11A2-201ENST00000341947 HAGHQ16775 308 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF766Q5HY98 468 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 ZFP62Q8NB50 900 aaPredicted RBP13.77□□□□□ -0.21
COL11A2-201ENST00000341947 ST8SIA4Q92187 359 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 AKR1E2Q96JD6 320 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 SPTY2D1-AS1A0A0U1RR47 76 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 A0A1B0GVG6 124 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 MYF5P13349 255 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 SOX18P35713 384 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 NRXN3Q9Y4C0 1643 aa13.77□□□□□ -0.21
COL11A2-201ENST00000341947 E5RGE8 158 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 CD1EP15812 388 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 COX5AP20674 150 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 CTU2Q2VPK5 515 aaKnown RBP13.76□□□□□ -0.21
COL11A2-201ENST00000341947 HES4Q9HCC6 221 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 NSG2Q9Y328 171 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 TOPAZ1Q8N9V7 1692 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 ATP6V1G2-DDX39BF2Z307 99 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 LRP3O75074 770 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 TSPAN12O95859 305 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 SMIM17P0DL12 118 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 ZNF239Q16600 458 aaKnown RBP13.76□□□□□ -0.21
COL11A2-201ENST00000341947 PTDSS2Q9BVG9 487 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 CLCF1Q9UBD9 225 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 DDOSTP39656 456 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 SPATA46Q5T0L3 261 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 SMIM19Q96E16 107 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 PCED1AQ9H1Q7 454 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 NUP98P52948 1817 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 OR5H8P0DN80 308 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 ATF1P18846 271 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 AKR1C3P42330 323 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 TRA2AQ13595 282 aaKnown RBP eCLIP13.76□□□□□ -0.21
COL11A2-201ENST00000341947 TMEM123Q8N131 208 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 SLC22A13Q9Y226 551 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 EIF3IQ13347 325 aaKnown RBP13.76□□□□□ -0.21
COL11A2-201ENST00000341947 CEACAM16Q2WEN9 425 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 NUDCD2Q8WVJ2 157 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 C14orf79Q96F83 325 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 RYDENQ9NUL5 291 aaKnown RBP13.76□□□□□ -0.21
COL11A2-201ENST00000341947 RNF24Q9Y225 148 aa13.76□□□□□ -0.21
COL11A2-201ENST00000341947 FCER1GP30273 86 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 GPM6AP51674 278 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 VMA21Q3ZAQ7 101 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 C4orf17Q53FE4 359 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 AKR7LQ8NHP1 331 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 SLC39A7Q92504 469 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 ARSGQ96EG1 525 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 CDCA4Q9BXL8 241 aa13.75□□□□□ -0.21
COL11A2-201ENST00000341947 PLEKHA2Q9HB19 425 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms