RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 CHPT1Q8WUD6 406 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 DCUN1D4Q92564 292 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF566Q969W8 418 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 ROPN1LQ96C74 230 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 AKR1E2Q96JD6 320 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 TSSK3Q96PN8 268 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 SLC25A33Q9BSK2 321 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 HEXA-AS1Q9H8Q6 139 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 TMEM100Q9NV29 134 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 PTTG3PQ9NZH4 202 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 TXNDC16Q9P2K2 825 aa8.5□□□□□ -1.05
ATXN3-201ENST00000340660 IGKV1D-42A0A075B6H8 117 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 IQCF6A8MYZ5 107 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 HSPA12AO43301 675 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 KLHL2O95198 593 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 C6orf47O95873 294 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 C2P06681 752 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 TPM1P09493 284 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 NAT1P18440 290 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 CD24P25063 80 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 ECHS1P30084 290 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 CENPAP49450 140 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF84P51523 738 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 LINC00205P59089 165 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 GABPB1Q06547 395 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-201ENST00000340660 MELKQ14680 651 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 FBXW12Q6X9E4 464 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 SLC36A1Q7Z2H8 476 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 PDIK1LQ8N165 341 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 FBXO36Q8NEA4 188 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 ACOT11Q8WXI4 607 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-201ENST00000340660 SEH1LQ96EE3 360 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 CCDC115Q96NT0 180 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 CPPED1Q9BRF8 314 aaPredicted RBP8.49□□□□□ -1.05
ATXN3-201ENST00000340660 OR51I1Q9H343 314 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 TBL2Q9Y4P3 447 aaKnown RBP8.49□□□□□ -1.05
ATXN3-201ENST00000340660 UGT2A1Q9Y4X1 527 aa8.49□□□□□ -1.05
ATXN3-201ENST00000340660 FAT4Q6V0I7 4981 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 HTR3EA5X5Y0 456 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 ODF3BA8MYP8 253 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 PLPP3O14495 311 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 DNALI1O14645 258 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 OVOL1O14753 267 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 PTBP3O95758 552 aaKnown RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 SDC1P18827 310 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 COPZ1P61923 177 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 MRPS34P82930 218 aaKnown RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF45Q02386 682 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 SLC34A1Q06495 639 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 FOXE3Q13461 319 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 HIST3H3Q16695 136 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 CFAP157Q5JU67 520 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 BEND6Q5SZJ8 279 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 GPR139Q6DWJ6 353 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 KRTAP5-3Q6L8H2 238 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 BAIAP2L2Q6UXY1 529 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 GPRIN3Q6ZVF9 776 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 C6orf120Q7Z4R8 191 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 NET1Q7Z628 596 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 DHDDSQ86SQ9 333 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 C4orf3Q8WVX3 66 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 XAGE5Q8WWM1 108 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 OR5P2Q8WZ92 322 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 SLC38A4Q969I6 547 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 MOAP1Q96BY2 351 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 SLC25A44Q96H78 314 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 HCAR1Q9BXC0 346 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 ELL3Q9HB65 397 aaPredicted RBP8.48□□□□□ -1.05
ATXN3-201ENST00000340660 SLCO1B3Q9NPD5 702 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 C1orf123Q9NWV4 160 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 BAIAP2L1Q9UHR4 511 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 HILPDAQ9Y5L2 63 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 LRP2P98164 4655 aa8.48□□□□□ -1.05
ATXN3-201ENST00000340660 TRAV36DV7A0A075B6V5 113 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 C11orf98E9PRG8 122 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-201ENST00000340660 TFF1P04155 84 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 ARG1P05089 322 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 OR8U8P0C7N1 319 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 LAMP1P11279 417 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 RPS4Y1P22090 263 aaKnown RBP8.47□□□□□ -1.05
ATXN3-201ENST00000340660 SPRP35270 261 aaPredicted RBP8.47□□□□□ -1.05
ATXN3-201ENST00000340660 PCK2Q16822 640 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 TM4SF20Q53R12 229 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 C1orf94Q6P1W5 598 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 SLC35D2Q76EJ3 337 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 ZNF440Q8IYI8 595 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 CAPSLQ8WWF8 208 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 SLC35G5Q96KT7 338 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 MOGAT1Q96PD6 335 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 NDUFAF1Q9Y375 327 aa8.47□□□□□ -1.05
ATXN3-201ENST00000340660 CDHR4A6H8M9 788 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 LRRN3E7EW58 273 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 M0R2N4 97 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 GSTA4O15217 222 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 OR2F2O95006 317 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 BGLAPP02818 100 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 ETFAP13804 333 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 POU1F1P28069 291 aa8.46□□□□□ -1.06
ATXN3-201ENST00000340660 SOAT1P35610 550 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms