RNA–Protein interactions for RNA: ENST00000340648.5

RRP1B-201, Transcript of ribosomal RNA processing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RRP1B, Length 5,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-201ENST00000340648 HS3ST3A1Q9Y663 406 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 C9orf170A2RU37 121 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 SCRG1O75711 98 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 PTAFRP25105 342 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 AGFG1P52594 562 aaKnown RBP13.37□□□□□ -0.27
RRP1B-201ENST00000340648 PJVKQ0ZLH3 352 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 RFLNBQ8N5W9 214 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 ZFP62Q8NB50 900 aaPredicted RBP13.37□□□□□ -0.27
RRP1B-201ENST00000340648 UBL7Q96S82 380 aaPredicted RBP13.37□□□□□ -0.27
RRP1B-201ENST00000340648 MMP26Q9NRE1 261 aa13.37□□□□□ -0.27
RRP1B-201ENST00000340648 TBXA2RP21731 343 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 LAP3P28838 519 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 ZNF239Q16600 458 aaKnown RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 Q5BKY6 102 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 SFTPA1Q8IWL2 248 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 OR5M9Q8NGP3 310 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 OR5M8Q8NGP6 311 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 SF3B6Q9Y3B4 125 aaKnown RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 A0A1W2PPV9 198 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 HSD17B6O14756 317 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 POU3F2P20265 443 aaPredicted RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 CSNK1EP49674 416 aaKnown RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 GVQW1Q8N7I0 195 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 FRRS1LQ9P0K9 344 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 OR1D5P58170 312 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 PCBD1P61457 104 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 TSEN54Q7Z6J9 526 aaKnown RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 ZAR1Q86SH2 424 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 ZDHHC22Q8N966 263 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 DTWD2Q8NBA8 298 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 PLEKHA3Q9HB20 300 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 SLC39A9Q9NUM3 307 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 GPR160Q9UJ42 338 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 PCDHGA9Q9Y5G4 932 aaKnown RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 GUSBP08236 651 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 GSTP1P09211 210 aaKnown RBP13.36□□□□□ -0.27
RRP1B-201ENST00000340648 MSX1P28360 303 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 CRYBA2P53672 197 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 FMODQ06828 376 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 TAF9Q16594 264 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 CST9LP1Q5W188 147 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 AAED1Q7RTV5 226 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 OR5AP2Q8NGF4 316 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 HGDQ93099 445 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 MOB1AQ9H8S9 216 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 KLF15Q9UIH9 416 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 TBX21Q9UL17 535 aa13.36□□□□□ -0.27
RRP1B-201ENST00000340648 ZNF831Q5JPB2 1677 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 E5RGE8 158 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 TCTN1Q2MV58 587 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 DPPA2Q7Z7J5 298 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 TMEM123Q8N131 208 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 PLEKHA2Q9HB19 425 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 ST6GALNAC2Q9UJ37 374 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 NSG2Q9Y328 171 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 KIAA0100Q14667 2235 aaKnown RBP13.35□□□□□ -0.27
RRP1B-201ENST00000340648 LTBP4Q8N2S1 1624 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 RBBP6Q7Z6E9 1792 aaKnown RBP13.35□□□□□ -0.27
RRP1B-201ENST00000340648 A0A1W2PPV4 95 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 CEBPZOSA8MTT3 80 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 OR5H8P0DN80 308 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 ABOP16442 354 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 GPR85P60893 370 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 TMEM196Q5HYL7 178 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 ATPAF1Q5TC12 328 aaPredicted RBP13.35□□□□□ -0.27
RRP1B-201ENST00000340648 CD200R1LQ6Q8B3 271 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 NPEPL1Q8NDH3 523 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 SEMA6DQ8NFY4 1073 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 APLNRP35414 380 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 RNF212Q495C1 297 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 OR10AC1Q8NH08 325 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 GDF2Q9UK05 429 aaPredicted RBP13.35□□□□□ -0.27
RRP1B-201ENST00000340648 TRAV8-7A0A075B6U6 113 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 RPS2P15880 293 aaKnown RBP13.35□□□□□ -0.27
RRP1B-201ENST00000340648 GDF1P27539 372 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 CBLN3Q6UW01 205 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 C1orf87Q8N0U7 546 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 PLK3Q9H4B4 646 aa13.35□□□□□ -0.27
RRP1B-201ENST00000340648 A0A1B0GX78 115 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 GFERP55789 205 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 PIGPP57054 158 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 KCNIP4Q6PIL6 250 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 PHYHIPLQ96FC7 376 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 KIRREL1Q96J84 757 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 SAMD10Q9BYL1 202 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 OR14J1Q9UGF5 321 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 OR6C6A6NF89 314 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 SIGLEC5O15389 551 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 ZNF121P58317 390 aaPredicted RBP13.34□□□□□ -0.27
RRP1B-201ENST00000340648 SIGLEC14Q08ET2 396 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 RBMS3Q6XE24 437 aaKnown RBP13.34□□□□□ -0.27
RRP1B-201ENST00000340648 PPP1R3BQ86XI6 285 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 ANKRD9Q96BM1 317 aaPredicted RBP13.34□□□□□ -0.27
RRP1B-201ENST00000340648 RAB39BQ96DA2 213 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 OR6C1Q96RD1 312 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 TMEM218A2RU14 115 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 ZGLP1P0C6A0 271 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 SCAND1P57086 179 aa13.34□□□□□ -0.27
RRP1B-201ENST00000340648 HBG1P69891 147 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms