RNA–Protein interactions for RNA: ENST00000340196.8

CCDC144CP-201, Transcript of coiled-coil domain containing 144C, pseudogene, humanhuman

TSL 2 BASIC

Gene CCDC144CP, Length 2,823 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144CP-201ENST00000340196 IGHV2-70P01814 119 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 CD74P04233 296 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 IGLV3-21P80748 117 aaPredicted RBP10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 OR2F1Q13607 317 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 ZNF260Q3ZCT1 412 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 TMEM164Q5U3C3 297 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 SLC25A42Q86VD7 318 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 C9orf40Q8IXQ3 194 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 GTPBP8Q8N3Z3 284 aaPredicted RBP10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 INO80EQ8NBZ0 244 aaPredicted RBP10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 NUBPLQ8TB37 319 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 ADAM19Q9H013 955 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 UBE2ZQ9H832 354 aaPredicted RBP10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 CHMP1AQ9HD42 196 aaPredicted RBP10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 SLC2A4RGQ9NR83 387 aa10.65□□□□□ -0.7
CCDC144CP-201ENST00000340196 EFSO43281 561 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 IFNA4P05014 189 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 HOXC4P09017 264 aaPredicted RBP10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 THEGLP0DJG4 465 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 VSIG8P0DPA2 414 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 RCC1P18754 421 aaPredicted RBP10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 PVALBP20472 110 aaPredicted RBP10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 RFC3P40938 356 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 TSC22D1Q15714 1073 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 FOXRED1Q96CU9 486 aaPredicted RBP10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 SPSB2Q99619 263 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 OR51M1Q9H341 326 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 HHLA2Q9UM44 414 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 CYP8B1Q9UNU6 501 aa10.65□□□□□ -0.71
CCDC144CP-201ENST00000340196 C3orf80F5H4A9 247 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 SDCBPO00560 298 aaPredicted RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 IGHV4-34P06331 123 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 ABOP16442 354 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 IL12BP29460 328 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 RGS19P49795 217 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 SNRPEP62304 92 aaKnown RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 FZD2Q14332 565 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 NKAPLQ5M9Q1 402 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 CLEC9AQ6UXN8 241 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 OR4K17Q8NGC6 315 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 OR5D18Q8NGL1 313 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 GLYATL2Q8WU03 294 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 MITD1Q8WV92 249 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 AQP3Q92482 292 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 PIK3IP1Q96FE7 263 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 MMP17Q9ULZ9 603 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 VDAC3Q9Y277 283 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 PHF3Q92576 2039 aaKnown RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 TRAV36DV7A0A075B6V5 113 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 TMED7-TICAM2A0A0A6YYA0 188 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 A0A0A6YYD4 124 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 SRSF10O75494 262 aaKnown RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 S100A9P06702 114 aaKnown RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 BCKDHBP21953 392 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 ZNF345Q14585 488 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 EMC4Q5J8M3 183 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 C1orf189Q5VU69 101 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 MAMDC2Q7Z304 686 aaPredicted RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 DMRTC2Q8IXT2 367 aaPredicted RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 PHB2Q99623 299 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 WDR77Q9BQA1 342 aaPredicted RBP10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 TBL1XR1Q9BZK7 514 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 FRYQ5TBA9 3013 aa10.64□□□□□ -0.71
CCDC144CP-201ENST00000340196 H3BML4 177 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SOCS1O15524 211 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 ZNF205O95201 554 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 NSA2O95478 260 aaKnown RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 CRYBA1P05813 215 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 CRHP06850 196 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 KLK3P07288 261 aaPredicted RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 MYF5P13349 255 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 ZNF16P17020 682 aaPredicted RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 GABRG2P18507 467 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 AKT2P31751 481 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 PTGFRP43088 359 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SCAND1P57086 179 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 C1orf140Q5VVS0 124 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 KCTD18Q6PI47 426 aaPredicted RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 LANCL3Q6ZV70 420 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 ZNF440Q8IYI8 595 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 PNLDC1Q8NA58 520 aaKnown RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 NPRL2Q8WTW4 380 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 LRRC61Q9BV99 259 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 PIGMQ9H3S5 423 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 LANCL2Q9NS86 450 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 PRODH2Q9UF12 536 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 TRIOBPQ9H2D6 2365 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 C9JQL5 133 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 ZNF354AO60765 605 aaPredicted RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SEMA4FO95754 770 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SMIM6P0DI80 62 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SRFP11831 508 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SLC25A4P12235 298 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 POU3F1Q03052 451 aaPredicted RBP10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 ROM1Q03395 351 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 PLCXD2Q0VAA5 305 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 SGCBQ16585 318 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 C21orf62-AS1Q17RA5 79 aa10.63□□□□□ -0.71
CCDC144CP-201ENST00000340196 MICBQ29980 383 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms