RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FAM57BQ71RH2 274 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 OR8G5Q8NG78 346 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 OR2Z1Q8NG97 314 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 RDH5Q92781 318 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 RFKQ969G6 155 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 RDH12Q96NR8 316 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 BPESC1Q9GZL8 116 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 GSX1Q9H4S2 264 aaPredicted RBP12.96□□□□□ -0.33
UBE3B-201ENST00000340074 DCLRE1BQ9H816 532 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 SAP30LQ9HAJ7 183 aa12.96□□□□□ -0.33
UBE3B-201ENST00000340074 ABCA1O95477 2261 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 A0A096LNT2 108 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 SLC16A6O15403 523 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 ENTPD6O75354 484 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 ADH4P08319 380 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 SELEP16581 610 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 ACHEP22303 614 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 GIFP27352 417 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 NR4A2P43354 598 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 CXCR4P61073 352 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 POU4F2Q12837 409 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 TMED1Q13445 227 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 RIN1Q13671 783 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 SPRNQ5BIV9 151 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 SLC25A30Q5SVS4 291 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 BIVMQ86UB2 503 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 ENTHD1Q8IYW4 607 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 ASB17Q8WXJ9 295 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 OR8B4Q96RC9 309 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 DIRC2Q96SL1 478 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 MNTQ99583 582 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 REPIN1Q9BWE0 567 aaKnown RBP12.96□□□□□ -0.34
UBE3B-201ENST00000340074 MROQ9BYG7 248 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 C8orf4Q9NR00 106 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 CLN6Q9NWW5 311 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF319Q9P2F9 582 aa12.96□□□□□ -0.34
UBE3B-201ENST00000340074 IGHV1-69-2A0A0G2JMI3 117 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 XRCC2O43543 280 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 CD55P08174 381 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 GABRB1P18505 474 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 MRPS11P82912 194 aaKnown RBP12.95□□□□□ -0.34
UBE3B-201ENST00000340074 TNFAIP6P98066 277 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-201ENST00000340074 ROM1Q03395 351 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 OCLNQ16625 522 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 TIGD6Q17RP2 521 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 DEGS2Q6QHC5 323 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF679Q8IYX0 411 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 PACRGLQ8N7B6 248 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF540Q8NDQ6 660 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF555Q8NEP9 628 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 OR10AD1Q8NGE0 317 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 OR52H1Q8NGJ2 320 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 OR13G1Q8NGZ3 307 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 SGK3Q96BR1 496 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 ELMOD3Q96FG2 381 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 PGAM5Q96HS1 289 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 TBX5Q99593 518 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 SLC30A2Q9BRI3 323 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 EGLN1Q9GZT9 426 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 NIPAL2Q9H841 368 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 SP140LQ9H930 580 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 CHODLQ9H9P2 273 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF275Q9NSD4 429 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-201ENST00000340074 NKX1-2Q9UD57 310 aaPredicted RBP12.95□□□□□ -0.34
UBE3B-201ENST00000340074 IKZF2Q9UKS7 526 aa12.95□□□□□ -0.34
UBE3B-201ENST00000340074 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.95□□□□□ -0.34
UBE3B-201ENST00000340074 TLN2Q9Y4G6 2542 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 GGT3PA6NGU5 568 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 CD300LBA8K4G0 201 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF670-ZNF695F2Z2N8 137 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 H0YL77 283 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 PHYHO14832 338 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 CASQ2O14958 399 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-201ENST00000340074 MAGEB4O15481 346 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-201ENST00000340074 RP2O75695 350 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 TNFSF4P23510 183 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 ATP6V1E1P36543 226 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 CRYBB2P43320 205 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 MTNR1AP48039 350 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 PSMA6P60900 246 aaKnown RBP12.94□□□□□ -0.34
UBE3B-201ENST00000340074 OGFRL1Q5TC84 451 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-201ENST00000340074 MEDAGQ5VYS4 303 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF322Q6U7Q0 402 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-201ENST00000340074 SSX6Q7RTT6 188 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 SPRYD4Q8WW59 207 aaPredicted RBP12.94□□□□□ -0.34
UBE3B-201ENST00000340074 SPSB4Q96A44 273 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 REEP6Q96HR9 211 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 APOL4Q9BPW4 351 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 OR10A2Q9H208 303 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 TMEM100Q9NV29 134 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 TREM2Q9NZC2 230 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 CACNG2Q9Y698 323 aa12.94□□□□□ -0.34
UBE3B-201ENST00000340074 CSPG4Q6UVK1 2322 aa12.93□□□□□ -0.34
UBE3B-201ENST00000340074 A0A1W2PQL4 384 aaPredicted RBP12.93□□□□□ -0.34
UBE3B-201ENST00000340074 MLNRO43193 412 aa12.93□□□□□ -0.34
UBE3B-201ENST00000340074 MPZL2O60487 215 aa12.93□□□□□ -0.34
UBE3B-201ENST00000340074 ZNF254O75437 659 aa12.93□□□□□ -0.34
UBE3B-201ENST00000340074 LY6G6DO95868 133 aa12.93□□□□□ -0.34
UBE3B-201ENST00000340074 HLA-DPB1P04440 258 aa12.93□□□□□ -0.34
UBE3B-201ENST00000340074 OR2T7P0C7T2 308 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms