RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 UCN2Q96RP3 112 aa13.17□□□□□ -0.3
RET-201ENST00000340058 MED18Q9BUE0 208 aa13.17□□□□□ -0.3
RET-201ENST00000340058 OR5V1Q9UGF6 321 aa13.17□□□□□ -0.3
RET-201ENST00000340058 IL11P20809 199 aa13.16□□□□□ -0.3
RET-201ENST00000340058 LUMP51884 338 aaPredicted RBP13.16□□□□□ -0.3
RET-201ENST00000340058 RRADP55042 308 aa13.16□□□□□ -0.3
RET-201ENST00000340058 SKP2Q13309 424 aa13.16□□□□□ -0.3
RET-201ENST00000340058 OR51H1Q8NH63 302 aa13.16□□□□□ -0.3
RET-201ENST00000340058 SNIP1Q8TAD8 396 aaKnown RBP13.16□□□□□ -0.3
RET-201ENST00000340058 SUCNR1Q9BXA5 334 aa13.16□□□□□ -0.3
RET-201ENST00000340058 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.16□□□□□ -0.3
RET-201ENST00000340058 PSME4Q14997 1843 aa13.16□□□□□ -0.3
RET-201ENST00000340058 A0A1B0GTQ1 180 aa13.16□□□□□ -0.3
RET-201ENST00000340058 OR2M5A3KFT3 312 aa13.16□□□□□ -0.3
RET-201ENST00000340058 PYCARD-AS1I3L0S3 204 aa13.16□□□□□ -0.3
RET-201ENST00000340058 PLPP3O14495 311 aa13.16□□□□□ -0.3
RET-201ENST00000340058 ZNF254O75437 659 aa13.16□□□□□ -0.3
RET-201ENST00000340058 GALNSP34059 522 aa13.16□□□□□ -0.3
RET-201ENST00000340058 TAS2R31P59538 309 aa13.16□□□□□ -0.3
RET-201ENST00000340058 CLINT1Q14677 625 aa13.16□□□□□ -0.3
RET-201ENST00000340058 TMEM91Q6ZNR0 172 aa13.16□□□□□ -0.3
RET-201ENST00000340058 CCDC71LQ8N9Z2 235 aa13.16□□□□□ -0.3
RET-201ENST00000340058 DEFB108BQ8NET1 73 aa13.16□□□□□ -0.3
RET-201ENST00000340058 PCED1AQ9H1Q7 454 aa13.16□□□□□ -0.3
RET-201ENST00000340058 CREBBPQ92793 2442 aa13.16□□□□□ -0.3
RET-201ENST00000340058 SEMA7AO75326 666 aa13.16□□□□□ -0.3
RET-201ENST00000340058 CCL3P10147 92 aa13.16□□□□□ -0.3
RET-201ENST00000340058 CSF2RBP32927 897 aa13.16□□□□□ -0.3
RET-201ENST00000340058 DDOSTP39656 456 aa13.16□□□□□ -0.3
RET-201ENST00000340058 RBP2P50120 134 aa13.16□□□□□ -0.3
RET-201ENST00000340058 FABP6P51161 128 aa13.16□□□□□ -0.3
RET-201ENST00000340058 OR11G2Q8NGC1 345 aa13.16□□□□□ -0.3
RET-201ENST00000340058 SMIM4Q8WVI0 70 aa13.16□□□□□ -0.3
RET-201ENST00000340058 ENY2Q9NPA8 101 aa13.16□□□□□ -0.3
RET-201ENST00000340058 RAB27BO00194 218 aa13.15□□□□□ -0.3
RET-201ENST00000340058 PHF1O43189 567 aaPredicted RBP13.15□□□□□ -0.3
RET-201ENST00000340058 HLA-HP01893 362 aa13.15□□□□□ -0.3
RET-201ENST00000340058 SNRPNP63162 240 aaKnown RBP13.15□□□□□ -0.3
RET-201ENST00000340058 SHBQ15464 509 aa13.15□□□□□ -0.3
RET-201ENST00000340058 TIGD3Q6B0B8 471 aa13.15□□□□□ -0.3
RET-201ENST00000340058 TMEM217Q8N7C4 229 aa13.15□□□□□ -0.3
RET-201ENST00000340058 MUCL1Q96DR8 90 aa13.15□□□□□ -0.3
RET-201ENST00000340058 PLPPR2Q96GM1 343 aa13.15□□□□□ -0.3
RET-201ENST00000340058 VRK1Q99986 396 aaPredicted RBP13.15□□□□□ -0.3
RET-201ENST00000340058 AKIRIN1Q9H9L7 192 aaPredicted RBP13.15□□□□□ -0.3
RET-201ENST00000340058 EXOGQ9Y2C4 368 aaKnown RBP13.15□□□□□ -0.3
RET-201ENST00000340058 HDGFL3Q9Y3E1 203 aa13.15□□□□□ -0.3
RET-201ENST00000340058 SBF1O95248 1867 aa13.15□□□□□ -0.3
RET-201ENST00000340058 NYNRINQ9P2P1 1898 aaKnown RBP13.15□□□□□ -0.3
RET-201ENST00000340058 WDR90Q96KV7 1748 aa13.15□□□□□ -0.3
RET-201ENST00000340058 TCRBV16S1A1N1A0A5B0 115 aa13.15□□□□□ -0.3
RET-201ENST00000340058 D6RAR5 112 aa13.15□□□□□ -0.3
RET-201ENST00000340058 TSPAN15O95858 294 aa13.15□□□□□ -0.3
RET-201ENST00000340058 EFEMP2O95967 443 aa13.15□□□□□ -0.3
RET-201ENST00000340058 IRF2P14316 349 aa13.15□□□□□ -0.3
RET-201ENST00000340058 PNLIPP16233 465 aa13.15□□□□□ -0.3
RET-201ENST00000340058 IL10RAQ13651 578 aa13.15□□□□□ -0.3
RET-201ENST00000340058 LILRB2Q8N423 598 aa13.15□□□□□ -0.3
RET-201ENST00000340058 HSD17B11Q8NBQ5 300 aa13.15□□□□□ -0.3
RET-201ENST00000340058 TRIB1Q96RU8 372 aa13.15□□□□□ -0.3
RET-201ENST00000340058 AIFM2Q9BRQ8 373 aa13.15□□□□□ -0.3
RET-201ENST00000340058 ZNF416Q9BWM5 594 aa13.15□□□□□ -0.3
RET-201ENST00000340058 TRAV8-7A0A075B6U6 113 aa13.15□□□□□ -0.3
RET-201ENST00000340058 RAB6AP20340 208 aa13.15□□□□□ -0.3
RET-201ENST00000340058 NME2P22392 152 aa13.15□□□□□ -0.3
RET-201ENST00000340058 NOVA1P51513 510 aaKnown RBP13.15□□□□□ -0.3
RET-201ENST00000340058 LRRTM1Q86UE6 522 aa13.15□□□□□ -0.3
RET-201ENST00000340058 SLC17A2O00624 439 aa13.15□□□□□ -0.31
RET-201ENST00000340058 ZNF205O95201 554 aa13.15□□□□□ -0.31
RET-201ENST00000340058 TAS2R46P59540 309 aa13.15□□□□□ -0.31
RET-201ENST00000340058 LSMEM1Q8N8F7 131 aa13.15□□□□□ -0.31
RET-201ENST00000340058 RELL2Q8NC24 303 aaPredicted RBP13.15□□□□□ -0.31
RET-201ENST00000340058 ABHD5Q8WTS1 349 aa13.15□□□□□ -0.31
RET-201ENST00000340058 MCHR2Q969V1 340 aa13.15□□□□□ -0.31
RET-201ENST00000340058 SDSLQ96GA7 329 aa13.15□□□□□ -0.31
RET-201ENST00000340058 ZC3H10Q96K80 434 aaKnown RBP13.15□□□□□ -0.31
RET-201ENST00000340058 FRRS1LQ9P0K9 344 aa13.15□□□□□ -0.31
RET-201ENST00000340058 ZNF230Q9UIE0 474 aaPredicted RBP13.15□□□□□ -0.31
RET-201ENST00000340058 SULT1B1O43704 296 aa13.14□□□□□ -0.31
RET-201ENST00000340058 MT-CO3P00414 261 aa13.14□□□□□ -0.31
RET-201ENST00000340058 ZNF728P0DKX0 622 aa13.14□□□□□ -0.31
RET-201ENST00000340058 INSM1Q01101 510 aaPredicted RBP13.14□□□□□ -0.31
RET-201ENST00000340058 OR1C1Q15619 314 aa13.14□□□□□ -0.31
RET-201ENST00000340058 ZNF774Q6NX45 483 aa13.14□□□□□ -0.31
RET-201ENST00000340058 NOXO1Q8NFA2 376 aa13.14□□□□□ -0.31
RET-201ENST00000340058 OR52N4Q8NGI2 321 aa13.14□□□□□ -0.31
RET-201ENST00000340058 GNG12Q9UBI6 72 aa13.14□□□□□ -0.31
RET-201ENST00000340058 NRASP01111 189 aa13.14□□□□□ -0.31
RET-201ENST00000340058 NGFRP08138 427 aa13.14□□□□□ -0.31
RET-201ENST00000340058 GZMKP49863 264 aa13.14□□□□□ -0.31
RET-201ENST00000340058 EDDM3BP56851 147 aa13.14□□□□□ -0.31
RET-201ENST00000340058 ACSM1Q08AH1 577 aa13.14□□□□□ -0.31
RET-201ENST00000340058 IRF3Q14653 427 aa13.14□□□□□ -0.31
RET-201ENST00000340058 OR2B11Q5JQS5 317 aa13.14□□□□□ -0.31
RET-201ENST00000340058 AADACL3Q5VUY0 350 aa13.14□□□□□ -0.31
RET-201ENST00000340058 UPRTQ96BW1 309 aa13.14□□□□□ -0.31
RET-201ENST00000340058 ZNF501Q96CX3 271 aaPredicted RBP13.14□□□□□ -0.31
RET-201ENST00000340058 REEP6Q96HR9 211 aa13.14□□□□□ -0.31
RET-201ENST00000340058 RGCCQ9H4X1 137 aa13.14□□□□□ -0.31
RET-201ENST00000340058 TAS2R5Q9NYW4 299 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 76.3 ms