RNA–Protein interactions for RNA: ENST00000340026.10

TRAF3IP2-201, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best) BASIC

Gene TRAF3IP2, Length 2,785 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-201ENST00000340026 ENDOGQ14249 297 aaKnown RBP9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 KRTAP27-1Q3LI81 207 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF584Q8IVC4 421 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 C20orf196Q8IYI0 205 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 FTMTQ8N4E7 242 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 FAM89BQ8N5H3 189 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR9K2Q8NGE7 335 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 KCNG3Q8TAE7 436 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 PP6455Q8WZ26 134 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SFXN2Q96NB2 322 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SPRY4Q9C004 299 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 KCNK15Q9H427 330 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 HPF1Q9NWY4 346 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 EIF3KQ9UBQ5 218 aaKnown RBP9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 KIF25Q9UIL4 384 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CACNA1CQ13936 2221 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 LINC01387J3KSC0 135 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 M0R233 179 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TPD52L2O43399 206 aaKnown RBP9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 RAMP1O60894 148 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 NOS1APO75052 506 aaPredicted RBP9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 MPC2O95563 127 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF20P17024 532 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 NFYAP23511 347 aaPredicted RBP9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CX3CR1P49238 355 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF81P51508 661 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TSPAN5P62079 268 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SSPNQ14714 243 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ARL6IP1Q15041 203 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 MOGAT2Q3SYC2 334 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TRIM61Q5EBN2 209 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 C6orf183Q5T699 404 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 FAM27BQ5VT28 67 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF627Q7L945 461 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SLC16A14Q7RTX9 510 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GPAT4Q86UL3 456 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 MUC20Q8N307 709 aaPredicted RBP9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR13C8Q8NGS7 320 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR10R2Q8NGX6 335 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR51E1Q8TCB6 317 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CDCP1Q9H5V8 836 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SLC39A1Q9NY26 324 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 UBQLN2Q9UHD9 624 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 POLR1DQ9Y2S0 133 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 MAB21L2Q9Y586 359 aa9.46□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TRIOBPQ9H2D6 2365 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 FOXI3A8MTJ6 420 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 DHHO43323 396 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR4E1P0C645 316 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 NAT2P11245 290 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CBX5P45973 191 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR3A3P47888 321 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CLDN17P56750 224 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 PPA1Q15181 289 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 NRN1LQ496H8 165 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 VAX1Q5SQQ9 334 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 DCAF12Q5T6F0 453 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TMEM65Q6PI78 240 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 IDO2Q6ZQW0 420 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 PPP1R32Q7Z5V6 425 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SLC25A42Q86VD7 318 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 LPAR5Q9H1C0 372 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 EXO5Q9H790 373 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SEC61A2Q9H9S3 476 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 BEX1Q9HBH7 125 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GPR84Q9NQS5 396 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 F5H5P2 479 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 RPA2P15927 270 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SFTPDP35247 375 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GNALP38405 381 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CASRP41180 1078 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 H2BFSP57053 126 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 SEC61A1P61619 476 aaKnown RBP9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 TAF13Q15543 124 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GRK1Q15835 563 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 RIPPLY2Q5TAB7 128 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ATPAF1Q5TC12 328 aaPredicted RBP9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 PRAMEF20Q5VT98 475 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 NAA40Q86UY6 237 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GALNT16Q8N428 558 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZIC4Q8N9L1 334 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF416Q9BWM5 594 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ZNF391Q9UJN7 358 aa9.45□□□□□ -0.9
TRAF3IP2-201ENST00000340026 LEUTXA8MZ59 168 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 H3BSH0 61 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 EIF1AYO14602 144 aaKnown RBP9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 RER1O15258 196 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 B3GALNT1O75752 331 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 CELA2AP08217 269 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GUCA1AP43080 201 aaPredicted RBP9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GMFBP60983 142 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 FGL1Q08830 312 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OPCMLQ14982 345 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 NHLRC3Q5JS37 347 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 ABLIM2Q6H8Q1 611 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 RTL6Q6ICC9 239 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 GPR137CQ8N3F9 429 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 BPIFB2Q8N4F0 458 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 OR5M1Q8NGP8 315 aa9.44□□□□□ -0.9
TRAF3IP2-201ENST00000340026 LOXL4Q96JB6 756 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms