RNA–Protein interactions for RNA: ENST00000339998.10

MBD1-203, Transcript of methyl-CpG binding domain protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD1, Length 2,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-203ENST00000339998 ARPC1BO15143 372 aaKnown RBP13.57□□□□□ -0.24
MBD1-203ENST00000339998 H2AFB2P0C5Z0 115 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 ZNF20P17024 532 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 MRPS15P82914 257 aaKnown RBP13.57□□□□□ -0.24
MBD1-203ENST00000339998 KCNMB1Q16558 191 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 Q5BKY6 102 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.57□□□□□ -0.24
MBD1-203ENST00000339998 GALNT16Q8N428 558 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 OR11H7Q8NGC8 314 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 KCNE4Q8WWG9 221 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 NICN1Q9BSH3 213 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 C20orf85Q9H1P6 137 aa13.57□□□□□ -0.24
MBD1-203ENST00000339998 ANKRD20A5PA0PJZ0 165 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 ACOT7O00154 380 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 FAHP16930 419 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR3A4PP47883 348 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 LHX2P50458 406 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 PMPCAQ10713 525 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 RNFT1Q5M7Z0 435 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 BAIAP2L2Q6UXY1 529 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 ANGPTL5Q86XS5 388 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 TMEM104Q8NE00 496 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR6M1Q8NGM8 313 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR56B4Q8NH76 319 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR2B2Q9GZK3 357 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 GHITMQ9H3K2 345 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 BANF2Q9H503 90 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 CALHM2Q9HA72 323 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 DIABLOQ9NR28 239 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 IGKV1-9A0A0C4DH69 117 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 ANXA7P20073 488 aaKnown RBP13.56□□□□□ -0.24
MBD1-203ENST00000339998 CASRP41180 1078 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 AIMP2Q13155 320 aaKnown RBP13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR5AS1Q8N127 324 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 GJC3Q8NFK1 279 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 SEC22CQ9BRL7 303 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 A0A096LPE4 126 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 A0A1W2PPZ6 126 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 CD3DP04234 171 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 CSN2P05814 226 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 ZNF32P17041 273 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 MEOX1P50221 254 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 SNRPD2P62316 118 aaKnown RBP13.56□□□□□ -0.24
MBD1-203ENST00000339998 TCF15Q12870 199 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 CSRP2Q16527 193 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 GSG1Q2KHT4 349 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 TSPO2Q5TGU0 170 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 Q6ZTK2 550 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 TUSC5Q8IXB3 177 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 NAXEQ8NCW5 288 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR4S1Q8NGB4 309 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR5D14Q8NGL3 314 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 OR4C16Q8NGL9 310 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 AKAP1Q92667 903 aaKnown RBP eCLIP13.56□□□□□ -0.24
MBD1-203ENST00000339998 PLEKHA1Q9HB21 404 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 TMEM138Q9NPI0 162 aa13.56□□□□□ -0.24
MBD1-203ENST00000339998 RBBP9O75884 186 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 VSIG8P0DPA2 414 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 RAB3AP20336 220 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 RAD52P43351 418 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 CLDN18P56856 261 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 LSM6P62312 80 aaKnown RBP13.55□□□□□ -0.24
MBD1-203ENST00000339998 OLFML2AQ68BL7 652 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 C1QL2Q7Z5L3 287 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 ADGRE4PQ86SQ3 457 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 SCMH1Q96GD3 660 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 PIEZO2Q9H5I5 2752 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 NUBP2Q9Y5Y2 271 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 M0QYG6 137 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 M0R135 149 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 DHFRP00374 187 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 ZNF93P35789 620 aaPredicted RBP13.55□□□□□ -0.24
MBD1-203ENST00000339998 ZNF84P51523 738 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 DYRK1AQ13627 763 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 ELFN2Q5R3F8 820 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 AWAT2Q6E213 333 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 SLC25A25Q6KCM7 469 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 GPR137CQ8N3F9 429 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 CHST4Q8NCG5 386 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 OR52B4Q8NGK2 314 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 ZNF799Q96GE5 643 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 MRI1Q9BV20 369 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 NIPAL2Q9H841 368 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 ZNF222Q9UK12 451 aa13.55□□□□□ -0.24
MBD1-203ENST00000339998 CEP295Q9C0D2 2601 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 H7C417 338 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 LDLRAD4O15165 306 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 HCKP08631 526 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 GTF2F2P13984 249 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 CCL11P51671 97 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 ZNF101Q8IZC7 436 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 GVQW1Q8N7I0 195 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 OR10K1Q8NGX5 313 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 WDR89Q96FK6 387 aaPredicted RBP13.54□□□□□ -0.24
MBD1-203ENST00000339998 MED28Q9H204 178 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 MTFP1Q9UDX5 166 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 CCL2P13500 99 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 PSMB1P20618 241 aaKnown RBP13.54□□□□□ -0.24
MBD1-203ENST00000339998 PRSS3P35030 304 aa13.54□□□□□ -0.24
MBD1-203ENST00000339998 UBE2MP61081 183 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms